RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ARSJQ5FYB0 599 aaPredicted RBP11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 ZNF684Q5T5D7 378 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 UNQ9370/PRO34162Q6UXP9 181 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 LINC00346Q8IVM7 164 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 PLPP7Q8NBV4 271 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 C12orf43Q96C57 262 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 PELI1Q96FA3 418 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 RCHY1Q96PM5 261 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 MCRIP2Q9BUT9 160 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 ABHD6Q9BV23 337 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 METTL8Q9H825 291 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 NIPAL2Q9H841 368 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 EMC7Q9NPA0 242 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 SSR3Q9UNL2 185 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 KLHDC2Q9Y2U9 406 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 SF3B6Q9Y3B4 125 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 A0A1B0GW55 424 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 TCRBV4S1A1TA0A5B7 111 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 H3BMQ9 156 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 M0R1W7 72 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 SYNGR1O43759 233 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 ALDOBP05062 364 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 CD1AP06126 327 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 DBHP09172 617 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 H2BFMP0C1H6 154 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 DUX4L2P0CJ85 424 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 DUX4L3P0CJ86 424 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 DUX4L4P0CJ87 422 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 DUX4L5P0CJ88 424 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 DUX4L6P0CJ89 424 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 DUX4L7P0CJ90 424 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 GALP22466 123 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 GADD45AP24522 165 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 PAX6P26367 422 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 VDAC2P45880 294 aaPredicted RBP11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 CDK5R1Q15078 307 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 ZNF829Q3KNS6 432 aaPredicted RBP11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 ZFAND6Q6FIF0 208 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 SLC16A12Q6ZSM3 486 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 GCSAMQ8N6F7 178 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 GJC3Q8NFK1 279 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 RNF133Q8WVZ7 376 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 SLAMF6Q96DU3 332 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 SMIM19Q96E16 107 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 DUX4Q9UBX2 424 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 MRM2Q9UI43 246 aaKnown RBP11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 ATPIF1Q9UII2 106 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 LHFPL6Q9Y693 200 aa11.85□□□□□ -0.51
HMGXB4-206ENST00000466438 TRBV23-1A0A0A0MS06 115 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 PNMA8CA0A1B0GUJ8 204 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 F2RL2O00254 374 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 RAMP3O60896 148 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 LALBAP00709 142 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 SERPINA3P01011 423 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 CHATP28329 748 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 HSD11B1P28845 292 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 DCTDP32321 178 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 GRB2P62993 217 aaKnown RBP11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 TAF13Q15543 124 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 OR8G1Q15617 311 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 CNPY1Q3B7I2 92 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 HCP5Q6MZN7 132 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 ADAMTSL5Q6ZMM2 481 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 MS4A15Q8N5U1 240 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 ZFP41Q8N8Y5 198 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 OR1F12Q8NHA8 337 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 CCL13Q99616 98 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 CHCHD6Q9BRQ6 235 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 NAA50Q9GZZ1 169 aaKnown RBP11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 COMMD4Q9H0A8 199 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 EXOSC4Q9NPD3 245 aaKnown RBP11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 C1orf123Q9NWV4 160 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 TCF19Q9Y242 345 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 GSTK1Q9Y2Q3 226 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 NOP16Q9Y3C1 178 aaKnown RBP11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 LRP12Q9Y561 859 aa11.84□□□□□ -0.51
HMGXB4-206ENST00000466438 IGHV3OR15-7A0A075B7D8 119 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 TRBV2A0A0J9YWF9 115 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 LOC100506127A0A0U1RQW1 187 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 PSMD9O00233 223 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 OGG1O15527 345 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 RPP14O95059 124 aaKnown RBP11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 PSKH1P11801 424 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 OPRL1P41146 370 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 CTF1Q16619 201 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 TMEM95Q3KNT9 176 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 DMKNQ6E0U4 476 aaPredicted RBP11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 CORO6Q6QEF8 472 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 SLC36A1Q7Z2H8 476 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 MRPL41Q8IXM3 137 aaKnown RBP11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 FAM216BQ8N7L0 139 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 THRSPQ92748 146 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 AMELYQ99218 206 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 TMED9Q9BVK6 235 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 SLC22A4Q9H015 551 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 HDHD2Q9H0R4 259 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms