RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 AUP1Q9Y679 476 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 JMJD1CQ15652 2540 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 ZNF737O75373 536 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 LIPFP07098 398 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 TMEM225BP0DP42 221 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 SRD5A1P18405 259 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 PSMA1P25786 263 aaKnown RBP16.8■□□□□ 0.28
SKA3-205ENST00000465471 ZNF93P35789 620 aaPredicted RBP16.8■□□□□ 0.28
SKA3-205ENST00000465471 RPS25P62851 125 aaKnown RBP16.8■□□□□ 0.28
SKA3-205ENST00000465471 TRAM1Q15629 374 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 SSX1Q16384 188 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 SPIN3Q5JUX0 258 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 ELP2Q6IA86 826 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 ZNF773Q6PK81 442 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 CDH26Q8IXH8 852 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 TEX29Q8N6K0 151 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 Q8NFD4 153 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 MRI1Q9BV20 369 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 OR14J1Q9UGF5 321 aa16.8■□□□□ 0.28
SKA3-205ENST00000465471 UCHL1P09936 223 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 PTGFRP43088 359 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 OR3A4PP47883 348 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 FAM27D1Q5T7N8 215 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 TMEM91Q6ZNR0 172 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 SATL1Q86VE3 508 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 PNLDC1Q8NA58 520 aaKnown RBP16.79■□□□□ 0.28
SKA3-205ENST00000465471 TMEM185AQ8NFB2 350 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 TNFAIP8L1Q8WVP5 186 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 GPER1Q99527 375 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 NKX3-1Q99801 234 aaPredicted RBP16.79■□□□□ 0.28
SKA3-205ENST00000465471 FAM234AQ9H0X4 552 aa16.79■□□□□ 0.28
SKA3-205ENST00000465471 PPIL3Q9H2H8 161 aaKnown RBP16.79■□□□□ 0.28
SKA3-205ENST00000465471 CHRM2P08172 466 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 MMP9P14780 707 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 PRKACAP17612 351 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 ADRA2CP18825 462 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 GABRA5P31644 462 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 COL10A1Q03692 680 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 ARMCX4Q5H9R4 360 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 FIP1L1Q6UN15 594 aaKnown RBP16.78■□□□□ 0.28
SKA3-205ENST00000465471 NKAIN3Q8N8D7 197 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 PHYHIPQ92561 330 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 FCGR1BQ92637 280 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 TMEM203Q969S6 136 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 UPRTQ96BW1 309 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 NDUFB11Q9NX14 153 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 IL36GQ9NZH8 169 aa16.78■□□□□ 0.28
SKA3-205ENST00000465471 K7N7A8 449 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 HAND1O96004 215 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 TK1P04183 234 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 MAS1P04201 325 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 NDUFB7P17568 137 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 MTNR1BP49286 362 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 BMXP51813 675 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 FGF12P61328 243 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 KLF17Q5JT82 389 aaPredicted RBP16.77■□□□□ 0.28
SKA3-205ENST00000465471 CEACAM19Q7Z692 300 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 LRRTM1Q86UE6 522 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 PRIMA1Q86XR5 153 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 SIRPDQ9H106 197 aa16.77■□□□□ 0.28
SKA3-205ENST00000465471 ELL3Q9HB65 397 aaPredicted RBP16.77■□□□□ 0.28
SKA3-205ENST00000465471 TRBV23-1A0A0A0MS06 115 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 TMEM82A0PJX8 343 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 RGS9O75916 674 aaPredicted RBP16.76■□□□□ 0.27
SKA3-205ENST00000465471 CALCBP10092 127 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 CD37P11049 281 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 SRP14P37108 136 aaKnown RBP16.76■□□□□ 0.27
SKA3-205ENST00000465471 FABP5Q01469 135 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 CD200R1LQ6Q8B3 271 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 C17orf107Q6ZR85 190 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 KIR3DL3Q8N743 410 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 OR51T1Q8NGJ9 327 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 NANPQ8TBE9 248 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 FAM192AQ9GZU8 254 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 CNTD2Q9H8S5 307 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 DSCAML1Q8TD84 2053 aa16.76■□□□□ 0.27
SKA3-205ENST00000465471 MEGF11A6BM72 1044 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 SRMP19623 302 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 LMO1P25800 156 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 DUSP1P28562 367 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 HSD17B12Q53GQ0 312 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 Q6P435 159 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 OR8H2Q8N162 312 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 H1FXQ92522 213 aaKnown RBP16.75■□□□□ 0.27
SKA3-205ENST00000465471 SNX22Q96L94 193 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 C1orf147Q96MC9 270 aaPredicted RBP16.75■□□□□ 0.27
SKA3-205ENST00000465471 TCF7L1Q9HCS4 588 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 EXOSC4Q9NPD3 245 aaKnown RBP16.75■□□□□ 0.27
SKA3-205ENST00000465471 C19orf12Q9NSK7 152 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 GSTK1Q9Y2Q3 226 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 KPTNQ9Y664 436 aa16.75■□□□□ 0.27
SKA3-205ENST00000465471 PSPNO60542 156 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 CDRT1O95170 752 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 OR2H2O95918 312 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 CAPZA1P52907 286 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 SNU13P55769 128 aaKnown RBP16.74■□□□□ 0.27
SKA3-205ENST00000465471 IL13RA2Q14627 380 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 RSU1Q15404 277 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 TUSC1Q2TAM9 212 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 NHLRC3Q5JS37 347 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms