RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RAI1Q7Z5J4 1906 aaPredicted RBP14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 C17orf100A8MU93 164 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 CDC14BO60729 498 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 CYB5AP00167 134 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 IGHV1-46P01743 117 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 PRKACBP22694 351 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 ERP29P30040 261 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 CDNFQ49AH0 187 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 ZNF782Q6ZMW2 699 aaPredicted RBP14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 FAM89BQ8N5H3 189 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 DMRTB1Q96MA1 342 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 SPACA5Q96QH8 159 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 HIST1H2AAQ96QV6 131 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 TMEM59Q9BXS4 323 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 DYNLRB1Q9NP97 96 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 ZDHHC8Q9ULC8 765 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 DSCAMO60469 2012 aa14.34□□□□□ -0.11
EXOSC3-203ENST00000465229 TMEM235A6NFC5 223 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 SNRPGP15A8MWD9 76 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 F5H5P2 479 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 CD3DP04234 171 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 ADH4P08319 380 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 VEGFCP49767 419 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 GZMKP49863 264 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 NKX2-5P52952 324 aaPredicted RBP14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 KRTAP10-9P60411 292 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 CNN3Q15417 329 aaKnown RBP14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 FCN2Q15485 313 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 GLDNQ6ZMI3 551 aaPredicted RBP14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 C20orf204Q6ZNR8 217 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 RNF144BQ7Z419 303 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 OR56B1Q8NGI3 324 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 OR5A2Q8NGI9 324 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 OR8S1Q8NH09 359 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 NPRL2Q8WTW4 380 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 IGFBPL1Q8WX77 278 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 ELMOD3Q96FG2 381 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 TECTBQ96PL2 329 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 BEX2Q9BXY8 128 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 NKIRAS2Q9NYR9 191 aa14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 NOP16Q9Y3C1 178 aaKnown RBP14.33□□□□□ -0.11
EXOSC3-203ENST00000465229 CACNA1DQ01668 2161 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 ARPC1BO15143 372 aaKnown RBP14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 SULT1A3P0DMM9 295 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 SULT1A4P0DMN0 295 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 TBPP20226 339 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 MPZP25189 248 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 MEF2DQ14814 521 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 PNLIPRP3Q17RR3 467 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 FAAP20Q6NZ36 180 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 SPERTQ8NA61 448 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 CHST4Q8NCG5 386 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 GAL3ST1Q99999 423 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 MICU1Q9BPX6 476 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 LIME1Q9H400 295 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 GPN1Q9HCN4 374 aaPredicted RBP14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 FBXO9Q9UK97 447 aaPredicted RBP14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 FLVCR2Q9UPI3 526 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 SLC7A11Q9UPY5 501 aa14.33□□□□□ -0.12
EXOSC3-203ENST00000465229 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 PQLC2LA1A4F0 135 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 ZNF736B4DX44 427 aaPredicted RBP14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 RAB3DO95716 219 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 MPIG6BO95866 241 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 PPOXP50336 477 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 GPM6AP51674 278 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 FUT6P51993 359 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 RPS27AP62979 156 aaKnown RBP14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 ZMYND11Q15326 602 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 SPRNQ5BIV9 151 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 FAM76BQ5HYJ3 339 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 WDR86Q86TI4 376 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 TMEM104Q8NE00 496 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 OR11H7Q8NGC8 314 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 NRGNQ92686 78 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 DIRC2Q96SL1 478 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 SLC25A21Q9BQT8 299 aaPredicted RBP14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 TM2D1Q9BX74 207 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 ALX4Q9H161 411 aaPredicted RBP14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 CXXC4Q9H2H0 198 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 ANAPC10Q9UM13 185 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 FLNBO75369 2602 aaKnown RBP14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 NAV2Q8IVL1 2488 aa14.32□□□□□ -0.12
EXOSC3-203ENST00000465229 IGKV1-27A0A075B6S5 117 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 A0A0A6YYD4 124 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 IGHV3-64DA0A0J9YX35 117 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 FAM230AA0A1W2PPH8 454 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 MEIS3P1A6NDR6 274 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 ZNF732B4DXR9 585 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 ANXA3P12429 323 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 GNG3P63215 75 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 CCL8P80075 99 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 MRPS15P82914 257 aaKnown RBP14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 ARL6IP1Q15041 203 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 LHFPL2Q6ZUX7 228 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 OR4D10Q8NGI6 311 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 OR51S1Q8NGJ8 323 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 TNFAIP8L1Q8WVP5 186 aa14.31□□□□□ -0.12
EXOSC3-203ENST00000465229 RAB3CQ96E17 227 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms