RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 OR5D18Q8NGL1 313 aa14.57□□□□□ -0.08
CPSF4-209ENST00000465132 EMG1Q92979 244 aaKnown RBP14.57□□□□□ -0.08
CPSF4-209ENST00000465132 MED30Q96HR3 178 aa14.57□□□□□ -0.08
CPSF4-209ENST00000465132 CENPOQ9BU64 300 aa14.57□□□□□ -0.08
CPSF4-209ENST00000465132 PPIL3Q9H2H8 161 aaKnown RBP14.57□□□□□ -0.08
CPSF4-209ENST00000465132 CNTD2Q9H8S5 307 aa14.57□□□□□ -0.08
CPSF4-209ENST00000465132 SEBOXQ9HB31 216 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-209ENST00000465132 MTCH1Q9NZJ7 389 aa14.57□□□□□ -0.08
CPSF4-209ENST00000465132 NLKQ9UBE8 527 aa14.57□□□□□ -0.08
CPSF4-209ENST00000465132 AK6Q9Y3D8 172 aaKnown RBP14.57□□□□□ -0.08
CPSF4-209ENST00000465132 SPRY1O43609 319 aaPredicted RBP14.56□□□□□ -0.08
CPSF4-209ENST00000465132 IGHV2-70P01814 119 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 SDC2P34741 201 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 ERVK11-1P61568 191 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 SCGB2A2Q13296 93 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 DGUOKQ16854 277 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 ZNF404Q494X3 552 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 GLIPR1L1Q6UWM5 242 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 ACP7Q6ZNF0 438 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 KCNG3Q8TAE7 436 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 HES4Q9HCC6 221 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 STEAP1Q9UHE8 339 aa14.56□□□□□ -0.08
CPSF4-209ENST00000465132 SMIM31A0A1B0GVY4 71 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 CCDC160A6NGH7 325 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 IFITM5A6NNB3 132 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 OR2AT4A6NND4 320 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 C3orf80F5H4A9 247 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 AIPO00170 330 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 SH2D1BO14796 132 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 CDRT1O95170 752 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 ARSBP15848 533 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 ADRA2CP18825 462 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 OR3A4PP47883 348 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 NPY4RP50391 375 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 SCAND1P57086 179 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 BLMHQ13867 455 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 ZMYND11Q15326 602 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 C11orf91Q3C1V1 193 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 PPP1R35Q8TAP8 253 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 TMEM165Q9HC07 324 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 HMG20AQ9NP66 347 aa14.55□□□□□ -0.08
CPSF4-209ENST00000465132 TRAV20A0A0B4J274 112 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 GPR37O15354 613 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 ANGPTL7O43827 346 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 HTR3BO95264 441 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 PRKACAP17612 351 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 CD80P33681 288 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 FGF12P61328 243 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 LSM3P62310 102 aaKnown RBP14.54□□□□□ -0.08
CPSF4-209ENST00000465132 AVPI1Q5T686 147 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 ATPAF1Q5TC12 328 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-209ENST00000465132 FAHD2BQ6P2I3 314 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-209ENST00000465132 OR2W3Q7Z3T1 314 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 OSR2Q8N2R0 312 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 CHST4Q8NCG5 386 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 Q8NFD4 153 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 OR8B3Q8NGG8 313 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 ZNF418Q8TF45 676 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-209ENST00000465132 FAHD2AQ96GK7 314 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 OR8B2Q96RD0 313 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 ZNF665Q9H7R5 613 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 SPACA1Q9HBV2 294 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 KAAG1Q9UBP8 84 aa14.54□□□□□ -0.08
CPSF4-209ENST00000465132 ZNF701M0R085 212 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-209ENST00000465132 CHRM2P08172 466 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 RPS2P15880 293 aaKnown RBP14.53□□□□□ -0.08
CPSF4-209ENST00000465132 BCL3P20749 454 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 SOX6P35712 828 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 SERPINB10P48595 397 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 GMFBP60983 142 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 IL13RA1P78552 427 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 IL13RA2Q14627 380 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 ZNF146Q15072 292 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 SLC22A6Q4U2R8 563 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 NHLRC3Q5JS37 347 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 SFRP4Q6FHJ7 346 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-209ENST00000465132 LYPD6Q86Y78 171 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 ZNF561Q8N587 486 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 DEFB108BQ8NET1 73 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 OR4D6Q8NGJ1 314 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 AP3S1Q92572 193 aa14.53□□□□□ -0.08
CPSF4-209ENST00000465132 NEIL1Q96FI4 390 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-209ENST00000465132 URM1Q9BTM9 101 aaKnown RBP14.53□□□□□ -0.08
CPSF4-209ENST00000465132 FAM90A10PA6NDY2 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A18PA6NE21 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A16PA6NEW6 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A20PA6NIJ5 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A8PA6NJQ4 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A7PA6NKC0 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A22PA8MWA6 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A12PA8MX19 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A5PA8MXJ8 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A23PA8MXZ1 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 CRTAPO75718 401 aaPredicted RBP14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A15PP0C7V4 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A13PP0C7W8 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A14PP0C7W9 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 FAM90A24PP0C7X0 464 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 SERPINA2P20848 420 aa14.52□□□□□ -0.09
CPSF4-209ENST00000465132 COMPP49747 757 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms