RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 SMIM18P0DKX4 95 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 PRKACAP17612 351 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 ZNF146Q15072 292 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 FAHD2BQ6P2I3 314 aaPredicted RBP15.69■□□□□ 0.1
LMNB1-204ENST00000463908 JAGN1Q8N5M9 183 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 OR4D6Q8NGJ1 314 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 RAB40AQ8WXH6 277 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 FAHD2AQ96GK7 314 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 C1orf147Q96MC9 270 aaPredicted RBP15.69■□□□□ 0.1
LMNB1-204ENST00000463908 FAM192AQ9GZU8 254 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 RHOFQ9HBH0 211 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 INSIG2Q9Y5U4 225 aa15.69■□□□□ 0.1
LMNB1-204ENST00000463908 KIR2DS1A0A191URI9 304 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 NKX6-3A6NJ46 265 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 ARL6IP5O75915 188 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 GALP22466 123 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 CALRP27797 417 aaKnown RBP15.68■□□□□ 0.1
LMNB1-204ENST00000463908 SNU13P55769 128 aaKnown RBP15.68■□□□□ 0.1
LMNB1-204ENST00000463908 COL10A1Q03692 680 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 CR1LQ2VPA4 569 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 C1orf229Q6ZS94 237 aaPredicted RBP15.68■□□□□ 0.1
LMNB1-204ENST00000463908 BTN2A1Q7KYR7 527 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 NKAIN3Q8N8D7 197 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 ST8SIA4Q92187 359 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 TMPRSS13Q9BYE2 586 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 OR51E2Q9H255 320 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 SLC25A10Q9UBX3 287 aaPredicted RBP15.68■□□□□ 0.1
LMNB1-204ENST00000463908 GSTK1Q9Y2Q3 226 aa15.68■□□□□ 0.1
LMNB1-204ENST00000463908 AK6Q9Y3D8 172 aaKnown RBP15.68■□□□□ 0.1
LMNB1-204ENST00000463908 A0A1W2PP11 408 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 TMEM82A0PJX8 343 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 ZNF737O75373 536 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 HTR3BO95264 441 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 HAND1O96004 215 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 CHRM2P08172 466 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 CD36P16671 472 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 MTNR1BP49286 362 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 FGF12P61328 243 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 PAX8Q06710 450 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 PDCD1Q15116 288 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 RSU1Q15404 277 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 LRRC10Q5BKY1 277 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 SPIN3Q5JUX0 258 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 C1orf100Q5SVJ3 147 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 C22orf42Q6IC83 251 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 Q6P435 159 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 GLIPR1L1Q6UWM5 242 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 ZNF561Q8N587 486 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 PNLDC1Q8NA58 520 aaKnown RBP15.67■□□□□ 0.1
LMNB1-204ENST00000463908 UQCC2Q9BRT2 126 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 SHARPINQ9H0F6 387 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 METTL9Q9H1A3 318 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 ELL3Q9HB65 397 aaPredicted RBP15.67■□□□□ 0.1
LMNB1-204ENST00000463908 TMEM160Q9NX00 188 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 TXNL4BQ9NX01 149 aaKnown RBP15.67■□□□□ 0.1
LMNB1-204ENST00000463908 IL36GQ9NZH8 169 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 OR5V1Q9UGF6 321 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 OPN4Q9UHM6 478 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 STUB1Q9UNE7 303 aa15.67■□□□□ 0.1
LMNB1-204ENST00000463908 MRPS28Q9Y2Q9 187 aaKnown RBP15.67■□□□□ 0.1
LMNB1-204ENST00000463908 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.67■□□□□ 0.16e-10■□□□□ 10.9
LMNB1-204ENST00000463908 TLN2Q9Y4G6 2542 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 IGHV2-70DA0A0C4DH43 119 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 K7N7A8 449 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 GADD45AP24522 165 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 FGF9P31371 208 aaPredicted RBP15.66■□□□□ 0.1
LMNB1-204ENST00000463908 CAV3P56539 151 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 C11orf91Q3C1V1 193 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 FAM120AOSQ5T036 256 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 DCAF12L2Q5VW00 463 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 CD276Q5ZPR3 534 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 GLT8D1Q68CQ7 371 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 C17orf107Q6ZR85 190 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 LY6G5BQ8NDX9 201 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 TMEM185AQ8NFB2 350 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 OR51T1Q8NGJ9 327 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 FOXRED1Q96CU9 486 aaPredicted RBP15.66■□□□□ 0.1
LMNB1-204ENST00000463908 NUDT16L1Q9BRJ7 211 aaKnown RBP15.66■□□□□ 0.1
LMNB1-204ENST00000463908 SLITRK2Q9H156 845 aa15.66■□□□□ 0.1
LMNB1-204ENST00000463908 TRAV1-2A0A0B4J238 106 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 A0A0G2JMP0 313 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 A0A0X1KG70 313 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 GPR37O15354 613 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 PSPNO60542 156 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 ECDO95905 644 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-204ENST00000463908 TK1P04183 234 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 NDUFB7P17568 137 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 GATA3P23771 443 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 LMO1P25800 156 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 SLC22A6Q4U2R8 563 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 FIP1L1Q6UN15 594 aaKnown RBP15.65■□□□□ 0.1
LMNB1-204ENST00000463908 OR4M2Q8NGB6 313 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 TBC1D15Q8TC07 691 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 SLC25A28Q96A46 364 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 YIPF6Q96EC8 236 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 DCTN5Q9BTE1 182 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 C7orf69Q9H7B7 122 aa15.65■□□□□ 0.1
LMNB1-204ENST00000463908 RPUSD1Q9UJJ7 312 aaKnown RBP15.65■□□□□ 0.1
LMNB1-204ENST00000463908 A0A0G2JK05 382 aa15.64■□□□□ 0.09
LMNB1-204ENST00000463908 J3QLI3 93 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms