RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 BBC3Q96PG8 261 aaPredicted RBP16.12■□□□□ 0.17
CCDC78-206ENST00000463539 CACNG6Q9BXT2 260 aa16.12■□□□□ 0.17
CCDC78-206ENST00000463539 SPRY3O43610 288 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 FUT3P21217 361 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 HLA-DMAP28067 261 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 CBX5P45973 191 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 CCR6P51684 374 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 ERVK11-1P61568 191 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 IKZF1Q13422 519 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 MPPED2Q15777 294 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 ATAD3CQ5T2N8 411 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 C11orf53Q8IXP5 236 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 SULT4A1Q9BR01 284 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 FAAP24Q9BTP7 215 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 UFSP2Q9NUQ7 469 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 COPZ2Q9P299 210 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 HIVEP3Q5T1R4 2406 aa16.11■□□□□ 0.17
CCDC78-206ENST00000463539 DIDO1Q9BTC0 2240 aaKnown RBP16.11■□□□□ 0.17
CCDC78-206ENST00000463539 B8ZZF3 427 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 H3BUI4 141 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 NXPH2O95156 264 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 ACAA1P09110 424 aaPredicted RBP16.1■□□□□ 0.17
CCDC78-206ENST00000463539 MRPS15P82914 257 aaKnown RBP16.1■□□□□ 0.17
CCDC78-206ENST00000463539 IL13RA2Q14627 380 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 RSBN1Q5VWQ0 802 aaPredicted RBP16.1■□□□□ 0.17
CCDC78-206ENST00000463539 SFRP4Q6FHJ7 346 aaPredicted RBP16.1■□□□□ 0.17
CCDC78-206ENST00000463539 ZNF826PQ6ZT77 177 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 POC1AQ8NBT0 407 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 OR4D10Q8NGI6 311 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 CREB3L1Q96BA8 519 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 UPRTQ96BW1 309 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 OR2V2Q96R30 315 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 OCSTAMPQ9BR26 566 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 AK3Q9UIJ7 227 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 RNF115Q9Y4L5 304 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 TPD52L2O43399 206 aaKnown RBP16.1■□□□□ 0.17
CCDC78-206ENST00000463539 NOS1APO75052 506 aaPredicted RBP16.1■□□□□ 0.17
CCDC78-206ENST00000463539 PTBP3O95758 552 aaKnown RBP16.1■□□□□ 0.17
CCDC78-206ENST00000463539 PRB1P04280 392 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 DUSP1P28562 367 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 BRICD5Q6PL45 260 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 WDR82Q6UXN9 313 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 OR4S1Q8NGB4 309 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 FBXW5Q969U6 566 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 NPDC1Q9NQX5 325 aaPredicted RBP16.1■□□□□ 0.17
CCDC78-206ENST00000463539 ZDHHC8Q9ULC8 765 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 ANAPC10Q9UM13 185 aa16.1■□□□□ 0.17
CCDC78-206ENST00000463539 PLCE1Q9P212 2302 aa16.09■□□□□ 0.17
CCDC78-206ENST00000463539 hCG_1807616A0A1W2PRN6 198 aa16.09■□□□□ 0.17
CCDC78-206ENST00000463539 RAB3DO95716 219 aa16.09■□□□□ 0.17
CCDC78-206ENST00000463539 SERPINF1P36955 418 aa16.09■□□□□ 0.17
CCDC78-206ENST00000463539 GMFBP60983 142 aa16.09■□□□□ 0.17
CCDC78-206ENST00000463539 OR52W1Q6IF63 320 aa16.09■□□□□ 0.17
CCDC78-206ENST00000463539 MEGF10Q96KG7 1140 aa16.09■□□□□ 0.17
CCDC78-206ENST00000463539 SPACA1Q9HBV2 294 aa16.09■□□□□ 0.17
CCDC78-206ENST00000463539 C1orf123Q9NWV4 160 aa16.09■□□□□ 0.17
CCDC78-206ENST00000463539 RCC2Q9P258 522 aaKnown RBP16.09■□□□□ 0.17
CCDC78-206ENST00000463539 FUOMA2VDF0 154 aa16.08■□□□□ 0.17
CCDC78-206ENST00000463539 E7EQL1 145 aa16.08■□□□□ 0.17
CCDC78-206ENST00000463539 C3orf80F5H4A9 247 aa16.08■□□□□ 0.17
CCDC78-206ENST00000463539 CD74P04233 296 aa16.08■□□□□ 0.17
CCDC78-206ENST00000463539 TCRBP04435 133 aa16.08■□□□□ 0.17
CCDC78-206ENST00000463539 FIP1L1Q6UN15 594 aaKnown RBP16.08■□□□□ 0.17
CCDC78-206ENST00000463539 ZNF782Q6ZMW2 699 aaPredicted RBP16.08■□□□□ 0.17
CCDC78-206ENST00000463539 SNAPC3Q92966 411 aa16.08■□□□□ 0.17
CCDC78-206ENST00000463539 CMSS1Q9BQ75 279 aaKnown RBP16.08■□□□□ 0.17
CCDC78-206ENST00000463539 MARVELD1Q9BSK0 173 aa16.08■□□□□ 0.17
CCDC78-206ENST00000463539 NUDT15Q9NV35 164 aa16.08■□□□□ 0.17
CCDC78-206ENST00000463539 ZNF701Q9NV72 531 aaPredicted RBP16.08■□□□□ 0.17
CCDC78-206ENST00000463539 NUBP2Q9Y5Y2 271 aa16.08■□□□□ 0.17
CCDC78-206ENST00000463539 UBE2QL1A1L167 161 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 M0QYG6 137 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 IGHV1-46P01743 117 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 TBPP20226 339 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 TNFSF4P23510 183 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 PMELP40967 661 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 BCAP31P51572 246 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 MEF2DQ14814 521 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 RNASE10Q5GAN6 216 aaKnown RBP16.08■□□□□ 0.16
CCDC78-206ENST00000463539 HOGA1Q86XE5 327 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 OR56B4Q8NH76 319 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 DYRK2Q92630 601 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 NEUROG1Q92886 237 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 HDHD3Q9BSH5 251 aaPredicted RBP16.08■□□□□ 0.16
CCDC78-206ENST00000463539 ST6GALNAC5Q9BVH7 336 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 TINAGL1Q9GZM7 467 aaPredicted RBP16.08■□□□□ 0.16
CCDC78-206ENST00000463539 HES4Q9HCC6 221 aa16.08■□□□□ 0.16
CCDC78-206ENST00000463539 ZNF230Q9UIE0 474 aaPredicted RBP16.08■□□□□ 0.16
CCDC78-206ENST00000463539 SIAH2O43255 324 aa16.07■□□□□ 0.16
CCDC78-206ENST00000463539 NAT1P18440 290 aa16.07■□□□□ 0.16
CCDC78-206ENST00000463539 TNFAIP6P98066 277 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-206ENST00000463539 SPIN3Q5JUX0 258 aa16.07■□□□□ 0.16
CCDC78-206ENST00000463539 OR4K15Q8NH41 348 aa16.07■□□□□ 0.16
CCDC78-206ENST00000463539 IFT22Q9H7X7 185 aa16.07■□□□□ 0.16
CCDC78-206ENST00000463539 FN3KRPQ9HA64 309 aa16.07■□□□□ 0.16
CCDC78-206ENST00000463539 C12orf4Q9NQ89 552 aa16.07■□□□□ 0.16
CCDC78-206ENST00000463539 IL19Q9UHD0 177 aa16.07■□□□□ 0.16
CCDC78-206ENST00000463539 PLEKHA6Q9Y2H5 1048 aa16.07■□□□□ 0.16
CCDC78-206ENST00000463539 TRAV6A0A075B6T7 132 aa16.06■□□□□ 0.16
CCDC78-206ENST00000463539 DEFB108AA8MXU0 73 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms