RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TMEM185AQ8NFB2 350 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 EMG1Q92979 244 aaKnown RBP14.56□□□□□ -0.08
VPS52-214ENST00000463486 MDFIQ99750 246 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 TMEM138Q9NPI0 162 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 C19orf12Q9NSK7 152 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 CHRM2P08172 466 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 OCMP0CE72 109 aaPredicted RBP14.55□□□□□ -0.08
VPS52-214ENST00000463486 NDUFB7P17568 137 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 DUSP1P28562 367 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 TGFBR2P37173 567 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 MED22Q15528 200 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 ARMCX4Q5H9R4 360 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 ELP2Q6IA86 826 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 C11orf42Q8N5U0 333 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 PXT1Q8NFP0 134 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 C22orf15Q8WYQ4 148 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 FAM234AQ9H0X4 552 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 PPIL3Q9H2H8 161 aaKnown RBP14.55□□□□□ -0.08
VPS52-214ENST00000463486 RHOFQ9HBH0 211 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 NEK6Q9HC98 313 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 ISYNA1Q9NPH2 558 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 KPTNQ9Y664 436 aa14.55□□□□□ -0.08
VPS52-214ENST00000463486 IGHV3OR16-10A0A075B7F0 116 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 TRBV23-1A0A0A0MS06 115 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 CENPVL3A0A0U1RRI6 287 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 PSPNO60542 156 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 TOX4O94842 621 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 HAND1O96004 215 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 CYB5AP00167 134 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 TMEM225BP0DP42 221 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 PRKACAP17612 351 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 LMO1P25800 156 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 BDKRB2P30411 391 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 SPIN3Q5JUX0 258 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 Q6P435 159 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 C1orf122Q6ZSJ8 110 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 MS4A15Q8N5U1 240 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 KIR3DL3Q8N743 410 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 H1FXQ92522 213 aaKnown RBP14.54□□□□□ -0.08
VPS52-214ENST00000463486 TNFRSF14Q92956 283 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 ZNF48Q96MX3 618 aaPredicted RBP14.54□□□□□ -0.08
VPS52-214ENST00000463486 SLC6A7Q99884 636 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 PCGF1Q9BSM1 259 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 NOX4Q9NPH5 578 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 FOXJ3Q9UPW0 622 aa14.54□□□□□ -0.08
VPS52-214ENST00000463486 VENTXO95231 258 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 PTGFRP43088 359 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 OR3A4PP47883 348 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 TBCEQ15813 527 aaPredicted RBP14.53□□□□□ -0.08
VPS52-214ENST00000463486 ACSM3Q53FZ2 586 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 FAM27D1Q5T7N8 215 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 LIPKQ5VXJ0 399 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 TMEM200BQ69YZ2 307 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 USP43Q70EL4 1123 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 TNFAIP8L1Q8WVP5 186 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 SNX22Q96L94 193 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 CCDC90BQ9GZT6 254 aa14.53□□□□□ -0.08
VPS52-214ENST00000463486 UNKLQ9H9P5 680 aaKnown RBP14.53□□□□□ -0.08
VPS52-214ENST00000463486 SF3B6Q9Y3B4 125 aaKnown RBP14.53□□□□□ -0.08
VPS52-214ENST00000463486 TRAV40A0A0B4J280 105 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 ZNF93P35789 620 aaPredicted RBP14.52□□□□□ -0.09
VPS52-214ENST00000463486 DLX1P56177 255 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 DLX6P56179 175 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 GABARAPL2P60520 117 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 PPP3R1P63098 170 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 EMX1Q04741 257 aaPredicted RBP14.52□□□□□ -0.09
VPS52-214ENST00000463486 MLLT11Q13015 90 aaPredicted RBP14.52□□□□□ -0.09
VPS52-214ENST00000463486 DDI2Q5TDH0 399 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 METTL11BQ5VVY1 283 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 TMEM91Q6ZNR0 172 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 VMO1Q7Z5L0 202 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 SATL1Q86VE3 508 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 OR8H2Q8N162 312 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 OR51T1Q8NGJ9 327 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 MGLLQ99685 303 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 TMED9Q9BVK6 235 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 OCEL1Q9H607 264 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 ACOT13Q9NPJ3 140 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 BLOC1S6Q9UL45 172 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 GSTK1Q9Y2Q3 226 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 TENM1Q9UKZ4 2725 aa14.52□□□□□ -0.09
VPS52-214ENST00000463486 A0A0A6YYJ9 748 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 M0R1W7 72 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 MAGEB3O15480 346 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 TCF21O43680 179 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 CDRT1O95170 752 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 OR2H2O95918 312 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 CD37P11049 281 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 CPEP16870 476 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 OR3A1P47881 315 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 MTNR1BP49286 362 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 CAPZA1P52907 286 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 SNU13P55769 128 aaKnown RBP14.51□□□□□ -0.09
VPS52-214ENST00000463486 HILS1P60008 231 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 RPL31P62899 125 aaKnown RBP14.51□□□□□ -0.09
VPS52-214ENST00000463486 PRB3Q04118 309 aaPredicted RBP14.51□□□□□ -0.09
VPS52-214ENST00000463486 SCGB2A2Q13296 93 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 PDCD1Q15116 288 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 BRD3OSQ6XYD6 125 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 TCF23Q7RTU1 214 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms