RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 OR51A4Q8NGJ6 313 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 OR13D1Q8NGV5 346 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 OR10AC1Q8NH08 325 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 PIFOQ8TCI5 191 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 SPSB1Q96BD6 273 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 SLC29A1Q99808 456 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 C9orf16Q9BUW7 83 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 NOTCH1P46531 2555 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 hADV38S2A0JD32 116 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 ODF3BA8MYP8 253 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 PSPNO60542 156 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 IGHV1-8P0DP01 117 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 DBTP11182 482 aaKnown RBP15.35■□□□□ 0.05
VARS-220ENST00000461874 PEX2P28328 305 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 DUSP1P28562 367 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 ALKBH1Q13686 389 aaKnown RBP15.35■□□□□ 0.05
VARS-220ENST00000461874 GALEQ14376 348 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 EDDM3AQ14507 147 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 ZNF146Q15072 292 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 LHFPL3Q86UP9 236 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 OR11H6Q8NGC7 330 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 OR52N4Q8NGI2 321 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 RHOXF1Q8NHV9 184 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 MRPL48Q96GC5 212 aaKnown RBP15.35■□□□□ 0.05
VARS-220ENST00000461874 ZNF714Q96N38 554 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 OPALINQ96PE5 141 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 MYCBPQ99417 103 aaPredicted RBP15.35■□□□□ 0.05
VARS-220ENST00000461874 ALG8Q9BVK2 526 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 MMP27Q9H306 513 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 S100A14Q9HCY8 104 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 RAB18Q9NP72 206 aa15.35■□□□□ 0.05
VARS-220ENST00000461874 VGLL3A8MV65 326 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 MPZL2O60487 215 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 MT-ND2P03891 347 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 ARG1P05089 322 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 CALCBP10092 127 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 PRKACAP17612 351 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 GABRR1P24046 479 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 KIR2DS4P43632 304 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 GRK1Q15835 563 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 SPIN3Q5JUX0 258 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 LIAT1Q6ZQX7 453 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 DYNAPQ8N1N2 210 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 SYS1Q8N2H4 156 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 ZNF676Q8N7Q3 588 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 OR4C13Q8NGP0 309 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 OR13C3Q8NGS6 347 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 Q96MT0 163 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 CHST6Q9GZX3 395 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 AMBNQ9NP70 447 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 MYRFQ9Y2G1 1151 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 SIGLEC9Q9Y336 463 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 TBL2Q9Y4P3 447 aaKnown RBP15.34■□□□□ 0.05
VARS-220ENST00000461874 LINC00312Q9Y6C7 94 aa15.34■□□□□ 0.05
VARS-220ENST00000461874 IGKV1-12A0A0C4DH73 117 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 MEGF11A6BM72 1044 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 MGST3O14880 152 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 FADS2O95864 444 aaKnown RBP15.33■□□□□ 0.04
VARS-220ENST00000461874 IGKV1D-12P01611 117 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 OCM2P0CE71 109 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 OCMP0CE72 109 aaPredicted RBP15.33■□□□□ 0.04
VARS-220ENST00000461874 DEFA6Q01524 100 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 LDLRAD2Q5SZI1 272 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 ZNF626Q68DY1 528 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 ZBTB49Q6ZSB9 765 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 RNF144BQ7Z419 303 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 TPRX1Q8N7U7 411 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 OR4S1Q8NGB4 309 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 OR13C9Q8NGT0 318 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 RFT1Q96AA3 541 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 MALSU1Q96EH3 234 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 ZNF649Q9BS31 505 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 RANBP3Q9H6Z4 567 aaPredicted RBP15.33■□□□□ 0.04
VARS-220ENST00000461874 ISG20L2Q9H9L3 353 aaKnown RBP15.33■□□□□ 0.04
VARS-220ENST00000461874 HMG20AQ9NP66 347 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 INPP5EQ9NRR6 644 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 GLS2Q9UI32 602 aa15.33■□□□□ 0.04
VARS-220ENST00000461874 LOC100130705A0A1B0GUX0 176 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 CHST1O43916 411 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 KDM4BO94953 1096 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 OR3A1P47881 315 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 EFNB2P52799 333 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 SNU13P55769 128 aaKnown RBP15.32■□□□□ 0.04
VARS-220ENST00000461874 RAB40BQ12829 278 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 C11orf88Q6PI97 169 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 PQLC1Q8N2U9 271 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 FOXRED1Q96CU9 486 aaPredicted RBP15.32■□□□□ 0.04
VARS-220ENST00000461874 SPACA5Q96QH8 159 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 ZCCHC4Q9H5U6 513 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 MRPS18AQ9NVS2 196 aaKnown RBP15.32■□□□□ 0.04
VARS-220ENST00000461874 FAM118AQ9NWS6 357 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 ERVK13-1Q9NX77 482 aa15.32■□□□□ 0.04
VARS-220ENST00000461874 SH2D1BO14796 132 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 ALX3O95076 343 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 ZFPL1O95159 310 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 RPSAP08865 295 aaKnown RBP15.31■□□□□ 0.04
VARS-220ENST00000461874 ERP29P30040 261 aaKnown RBP15.31■□□□□ 0.04
VARS-220ENST00000461874 RAB13P51153 203 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 MRPL28Q13084 256 aaKnown RBP15.31■□□□□ 0.04
VARS-220ENST00000461874 DYNC1I2Q13409 638 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms