RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 DMRTB1Q96MA1 342 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 MGLLQ99685 303 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 NKX3-1Q99801 234 aaPredicted RBP17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 TMED9Q9BVK6 235 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 NOX4Q9NPH5 578 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 HSMCR30P0CW71 290 aa17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 CALCBP10092 127 aa17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 FGF12P61328 243 aa17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 COL10A1Q03692 680 aa17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 DDI2Q5TDH0 399 aa17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 SATL1Q86VE3 508 aa17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 THRSPQ92748 146 aa17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 CNTD2Q9H8S5 307 aa17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 ELL3Q9HB65 397 aaPredicted RBP17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 CKLFQ9UBR5 152 aa17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 SF3B6Q9Y3B4 125 aaKnown RBP17.01■□□□□ 0.31
RPUSD3-210ENST00000460909 K7N7A8 449 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 CHRM2P08172 466 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 NDUFB7P17568 137 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 PRKACAP17612 351 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 MAPK3P27361 379 aaPredicted RBP17■□□□□ 0.31
RPUSD3-210ENST00000460909 ZNF93P35789 620 aaPredicted RBP17■□□□□ 0.31
RPUSD3-210ENST00000460909 PTGFRP43088 359 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 OR3A4PP47883 348 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 KRTAP21-3Q3LHN1 58 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 SPIN3Q5JUX0 258 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 FAM27D1Q5T7N8 215 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 ELP2Q6IA86 826 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 TMEM91Q6ZNR0 172 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 ZNF367Q7RTV3 350 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 LYPD6Q86Y78 171 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 PHC2Q8IXK0 858 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 SPARTQ8N0X7 666 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 Q8NFD4 153 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 TNFAIP8L1Q8WVP5 186 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 H1FXQ92522 213 aaKnown RBP17■□□□□ 0.31
RPUSD3-210ENST00000460909 GPER1Q99527 375 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 FAM234AQ9H0X4 552 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 SIRPDQ9H106 197 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 PPIL3Q9H2H8 161 aaKnown RBP17■□□□□ 0.31
RPUSD3-210ENST00000460909 LRRC42Q9Y546 428 aa17■□□□□ 0.31
RPUSD3-210ENST00000460909 TMEM82A0PJX8 343 aa16.99■□□□□ 0.31
RPUSD3-210ENST00000460909 HAND1O96004 215 aa16.99■□□□□ 0.31
RPUSD3-210ENST00000460909 TK1P04183 234 aa16.99■□□□□ 0.31
RPUSD3-210ENST00000460909 DUSP1P28562 367 aa16.99■□□□□ 0.31
RPUSD3-210ENST00000460909 ARF6P62330 175 aa16.99■□□□□ 0.31
RPUSD3-210ENST00000460909 C17orf107Q6ZR85 190 aa16.99■□□□□ 0.31
RPUSD3-210ENST00000460909 TMEM203Q969S6 136 aa16.99■□□□□ 0.31
RPUSD3-210ENST00000460909 WDFY2Q96P53 400 aa16.99■□□□□ 0.31
RPUSD3-210ENST00000460909 TBX15Q96SF7 602 aa16.99■□□□□ 0.31
RPUSD3-210ENST00000460909 ATRQ13535 2644 aa16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 TRBV23-1A0A0A0MS06 115 aa16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 IGHV4-38-2P0DP08 117 aa16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 CAPZA1P52907 286 aa16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 RPS25P62851 125 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 TUSC1Q2TAM9 212 aa16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 ARMCX4Q5H9R4 360 aa16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 FIP1L1Q6UN15 594 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 CDH26Q8IXH8 852 aa16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 GSTK1Q9Y2Q3 226 aa16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 KPTNQ9Y664 436 aa16.98■□□□□ 0.31
RPUSD3-210ENST00000460909 FBN1P35555 2871 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 DSCAML1Q8TD84 2053 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 TOX4O94842 621 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 CDRT1O95170 752 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 IFNA2P01563 188 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 MAS1P04201 325 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 UCHL1P09936 223 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 EPHA1P21709 976 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 MTNR1BP49286 362 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 SNU13P55769 128 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 SSX1Q16384 188 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 UBE2UQ5VVX9 321 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 Q6P435 159 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 CEACAM19Q7Z692 300 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 SVOPQ8N4V2 548 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 ASCC1Q8N9N2 400 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 SNX22Q96L94 193 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 C19orf12Q9NSK7 152 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 NUP50Q9UKX7 468 aa16.97■□□□□ 0.31
RPUSD3-210ENST00000460909 PSPNO60542 156 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 OR2H2O95918 312 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 LMO1P25800 156 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 TRAM1Q15629 374 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 METTL11BQ5VVY1 283 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 LRRTM1Q86UE6 522 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 OR8H2Q8N162 312 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 KIR3DL3Q8N743 410 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 Q8N7P7 452 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 OR51T1Q8NGJ9 327 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 OR10K1Q8NGX5 313 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 PHYHIPQ92561 330 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 PCGF1Q9BSM1 259 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 FAM192AQ9GZU8 254 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 IL36GQ9NZH8 169 aa16.96■□□□□ 0.31
RPUSD3-210ENST00000460909 SH2D1BO14796 132 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 CD37P11049 281 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 PSMA1P25786 263 aaKnown RBP16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 GABRA5P31644 462 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 BMXP51813 675 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms