RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SERPINB7O75635 380 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 CNMDO75829 334 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 RALBP11234 206 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 HLA-EP13747 358 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 TCP1P17987 556 aaKnown RBP1.82□□□□□ -2.12
RFC4-211ENST00000460408 MYL9P24844 172 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 TALDO1P37837 337 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 GPR1P46091 355 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 DAOAP59103 153 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 OR2B8PP59922 312 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 C5orf64Q2M2E5 130 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 DNLZQ5SXM8 178 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 LINC00336Q6ZUF6 198 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 UNC93AQ86WB7 457 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 ZNF101Q8IZC7 436 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 INO80EQ8NBZ0 244 aaPredicted RBP1.82□□□□□ -2.12
RFC4-211ENST00000460408 OR1J4Q8NGS1 313 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 CA5BP1Q8WTZ4 195 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 NAT6Q93015 286 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 CLDN23Q96B33 292 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 APH1AQ96BI3 265 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 CSPG4P5Q96PW8 444 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 TEAD3Q99594 435 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 MCUBQ9NWR8 336 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 Q9Y3F1 56 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 DOCK8Q8NF50 2099 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 COL1A2P08123 1366 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 PTPRSQ13332 1948 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 DNHD1Q96M86 4753 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 TET1Q8NFU7 2136 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 MED13LQ71F56 2210 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 SLC22A20A6NK97 555 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 SERPINE3A8MV23 424 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 K7EM74 188 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 EIF1BO60739 113 aaKnown RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 MPDU1O75352 247 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 FARS2O95363 451 aaKnown RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 PAHP00439 452 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 IGLV2-8P01709 118 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 CATP04040 527 aaKnown RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 CD5P06127 495 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 GFAPP14136 432 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 ZNF14P17017 642 aaPredicted RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 IL1RNP18510 177 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 GGT2P36268 569 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 EIF1P41567 113 aaKnown RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 PRLHRP49683 370 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 UBE2E1P51965 193 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 ATP6V0D1P61421 351 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 TFDP2Q14188 446 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 KLHL40Q2TBA0 621 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 ST20-AS1Q8NBB2 130 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 UBAC2Q8NBM4 344 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 PROKR2Q8NFJ6 384 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 OR9A2Q8NGT5 310 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 OR13G1Q8NGZ3 307 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 RTN4IP1Q8WWV3 396 aaPredicted RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 GHSRQ92847 366 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 UBE2E2Q96LR5 201 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 SULT4A1Q9BR01 284 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 CHCHD7Q9BUK0 85 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 ZNF717Q9BY31 904 aaPredicted RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 ULBP2Q9BZM5 246 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 OR2AG1Q9H205 316 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 PLEKHF2Q9H8W4 249 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 FBXO6Q9NRD1 293 aaPredicted RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 TREX1Q9NSU2 369 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 RBFOX1Q9NWB1 397 aaKnown RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 ENOPH1Q9UHY7 261 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 CBY1Q9Y3M2 126 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 HES2Q9Y543 173 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 CSPG4Q6UVK1 2322 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 COL5A1P20908 1838 aaPredicted RBP1.81□□□□□ -2.12
RFC4-211ENST00000460408 PATJQ8NI35 1801 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 NID2Q14112 1375 aa1.81□□□□□ -2.12
RFC4-211ENST00000460408 NIPBLQ6KC79 2804 aaeCLIP1.81□□□□□ -2.12
RFC4-211ENST00000460408 FBN1P35555 2871 aaKnown RBP1.8□□□□□ -2.12
RFC4-211ENST00000460408 SPEF2Q9C093 1822 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 COL27A1Q8IZC6 1860 aaPredicted RBP1.8□□□□□ -2.12
RFC4-211ENST00000460408 HIVEP1P15822 2718 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 CSMD1Q96PZ7 3565 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 OTOGQ6ZRI0 2925 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 IGHV3-49A0A0A0MS15 119 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 A0A0B4J2E0 115 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 PCNX2A6NKB5 2137 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 SLC19A2O60779 497 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 SNAI1O95863 264 aaPredicted RBP1.8□□□□□ -2.12
RFC4-211ENST00000460408 MT-ND4P03905 459 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 IL4P05112 153 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 OR1G1P47890 313 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 CCNG1P51959 295 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 TAS2R39P59534 338 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 PIGHQ14442 188 aaPredicted RBP1.8□□□□□ -2.12
RFC4-211ENST00000460408 SLC25A35Q3KQZ1 300 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 YIF1BQ5BJH7 314 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 FAM222AQ5U5X8 452 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 KDM4DQ6B0I6 523 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 OR2T5Q6IEZ7 315 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 SLC25A34Q6PIV7 304 aa1.8□□□□□ -2.12
RFC4-211ENST00000460408 CD300LGQ6UXG3 332 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms