RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 GINS4Q9BRT9 223 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 CACNG6Q9BXT2 260 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 PECRQ9BY49 303 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 LPAR5Q9H1C0 372 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 POFUT1Q9H488 388 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 PPP1R3EQ9H7J1 279 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 ZMAT3Q9HA38 289 aaKnown RBP4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 C12orf4Q9NQ89 552 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 NECAP2Q9NVZ3 263 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 ETAA1Q9NY74 926 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 MTFP1Q9UDX5 166 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 TRAPPC2LQ9UL33 140 aa4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 RBM7Q9Y580 266 aaKnown RBP4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 TPRP12270 2363 aaKnown RBP4.97□□□□□ -1.61
RNU1-88P-201ENST00000459274 IGKV1-27A0A075B6S5 117 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 IGHV1-69-2A0A0G2JMI3 117 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 hCG_1809904A0A1W2PP81 198 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 A0A1W2PPE2 198 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 A0A1W2PR64 198 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 A0A1W2PRV1 198 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 SHISA9B4DS77 424 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 H0YL77 283 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 J3QKU1 62 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 RAB27BO00194 218 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 GEMIN2O14893 280 aaKnown RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 LDLRAD4O15165 306 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 SOCS1O15524 211 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 SYNGR1O43759 233 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 NOS1APO75052 506 aaPredicted RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 HAND1O96004 215 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 KNG1P01042 644 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 IGHV1-46P01743 117 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 HLA-DQB1P01920 261 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 TK1P04183 234 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 PRB1P04280 392 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 AMY2AP04746 511 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 RLN1P04808 185 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 FCER2P06734 321 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ADH4P08319 380 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 MELTFP08582 738 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 CSF3P09919 207 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 PGA5P0DJD9 388 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 DTYMKP23919 212 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 CCKARP32238 428 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 CFHR2P36980 270 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 GATA4P43694 442 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 PTH2RP49190 550 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 PPOXP50336 477 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 EFNB2P52799 333 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 DGCR2P98153 550 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 UNC119Q13432 240 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 DAZAP2Q15038 168 aaPredicted RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 RBMS2Q15434 407 aaKnown RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 GRK1Q15835 563 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF79Q15937 498 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 PIGYQ3MUY2 71 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF260Q3ZCT1 412 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 SCGB2B2Q4G0G5 96 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ABCA11PQ4W5N1 156 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 NHLRC3Q5JS37 347 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 C6orf183Q5T699 404 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 STEAP1BQ6NZ63 245 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 MOB1BQ7L9L4 216 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 NLRC3Q7RTR2 1065 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 C6orf201Q7Z4U5 140 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 MOGAT3Q86VF5 341 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 DMRTC2Q8IXT2 367 aaPredicted RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 MUC20Q8N307 709 aaPredicted RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF561Q8N587 486 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 TMEM104Q8NE00 496 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 BEST4Q8NFU0 473 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 OR6F1Q8NGZ6 308 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 OR52I2Q8NH67 350 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 LILRB1Q8NHL6 650 aaPredicted RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZFAND1Q8TCF1 268 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ITLN1Q8WWA0 313 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 HPSE2Q8WWQ2 592 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 GTF3AQ92664 365 aaKnown RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 RDH5Q92781 318 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 SNAPC3Q92966 411 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ARHGAP5-AS1Q96IT6 56 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 NKX3-1Q99801 234 aaPredicted RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 SLC25A21Q9BQT8 299 aaPredicted RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 OCSTAMPQ9BR26 566 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 NICN1Q9BSH3 213 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 FAAP24Q9BTP7 215 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 DPCDQ9BVM2 203 aaPredicted RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 DNTTIP1Q9H147 329 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF665Q9H7R5 613 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 UBTD1Q9HAC8 227 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 RBFOX1Q9NWB1 397 aaKnown RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 TREM2Q9NZC2 230 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 MTCH1Q9NZJ7 389 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 CRIM1Q9NZV1 1036 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 NLKQ9UBE8 527 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 KLK11Q9UBX7 282 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 C14orf166Q9Y224 244 aaKnown RBP4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 NUBP2Q9Y5Y2 271 aa4.96□□□□□ -1.62
RNU1-88P-201ENST00000459274 ANKRD11Q6UB99 2663 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms