RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 NPBWR2P48146 333 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 ZNF84P51523 738 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 H3F3AP84243 136 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 ADPRHL1Q8NDY3 354 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 NSG2Q9Y328 171 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 KPTNQ9Y664 436 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 ESPL1Q14674 2120 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 IGLV3-1P01715 115 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 B2MP61769 119 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 POLR2GP62487 172 aaKnown RBP eCLIP16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 CCL20P78556 96 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 SLC23A3Q6PIS1 610 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 Q6ZPA2 131 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 TMEM123Q8N131 208 aa16.98■□□□□ 0.31
CNEP1R1-203ENST00000458059 KNTC1P50748 2209 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 ADAMTS20P59510 1910 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 BORCS7-ASMTA0A0B4J1R7 106 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 ZIC3O60481 467 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 CST7O76096 145 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 NRASP01111 189 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 HEXAP06865 529 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 FBP1P09467 338 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 JMJD7P0C870 316 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 RBP2P50120 134 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 CTAG1AP78358 180 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 PLCXD3Q63HM9 321 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 NSUN5P2Q63ZY6 315 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 CARFQ8N187 725 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 RNF138Q8WVD3 245 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 LUZP4Q9P127 313 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 C19orf25Q9UFG5 118 aaPredicted RBP16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 TIMM10BQ9Y5J6 103 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 IGLV3-32A0A0A0MS00 114 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 NKX2-6A6NCS4 301 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 ZNF133P52736 654 aaPredicted RBP16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 NCMAPQ5T1S8 102 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 CALHM1Q8IU99 346 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 UBAC2Q8NBM4 344 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 ZNF700Q9H0M5 742 aa16.97■□□□□ 0.31
CNEP1R1-203ENST00000458059 TRAPPC6AO75865 159 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 CHATP28329 748 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 ALDH3B1P43353 468 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 FAM3AP98173 230 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 ZNF92Q03936 586 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 PPA1Q15181 289 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 ZNF385CQ66K41 422 aaPredicted RBP16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 P4HA3Q7Z4N8 544 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 KCNJ16Q9NPI9 418 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 PARPBPQ9NWS1 579 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 URGCP-MRPS24S4R325 110 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 NSG1A0A0A6YYJ2 146 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 GAPDHP04406 335 aaKnown RBP16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 CCL4P13236 92 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 HERV-K104P61576 105 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 PCOLCEQ15113 449 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 HAGHQ16775 308 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 FAM180AQ6UWF9 173 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 TMEM54Q969K7 222 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 MMP24Q9Y5R2 645 aa16.96■□□□□ 0.31
CNEP1R1-203ENST00000458059 KIAA2026Q5HYC2 2103 aa16.96■□□□□ 0.3
CNEP1R1-203ENST00000458059 PQLC2LA1A4F0 135 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 ZNF727A8MUV8 499 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 SSSCA1O60232 199 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 DANCRP0C864 163 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 RGS19P49795 217 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 LIAT1Q6ZQX7 453 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 SLC25A26Q70HW3 274 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 SKA3Q8IX90 412 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 DMBX1Q8NFW5 382 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 STARD10Q9Y365 291 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 ZNF587BE7ETH6 402 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 ST8SIA3O43173 380 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 CTSSP25774 331 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 SULT1A1P50225 295 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 OSR2Q8N2R0 312 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 ZNF565Q8N9K5 539 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 NAT6Q93015 286 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 PLEKHA2Q9HB19 425 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 IL36RNQ9UBH0 155 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 TRBV23-1A0A0A0MS06 115 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 CXCL13O43927 109 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 S100A9P06702 114 aaKnown RBP16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 RUNX1Q01196 453 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 C10orf128Q5T292 105 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 C15orf54Q8N8G6 183 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 OR14L1PQ8NHC6 308 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 HS3ST6Q96QI5 342 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 PAPOLGQ9BWT3 736 aaKnown RBP16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 PROK2Q9HC23 129 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 R4GN57 208 aa16.95■□□□□ 0.3
CNEP1R1-203ENST00000458059 LIFP15018 202 aa16.94■□□□□ 0.3
CNEP1R1-203ENST00000458059 RPS18P62269 152 aaKnown RBP16.94■□□□□ 0.3
CNEP1R1-203ENST00000458059 OR1F12Q8NHA8 337 aa16.94■□□□□ 0.3
CNEP1R1-203ENST00000458059 MSI2Q96DH6 328 aaKnown RBP16.94■□□□□ 0.3
CNEP1R1-203ENST00000458059 NCOR1O75376 2440 aa16.94■□□□□ 0.3
CNEP1R1-203ENST00000458059 TRAV20A0A0B4J274 112 aa16.94■□□□□ 0.3
CNEP1R1-203ENST00000458059 H3BP45 60 aa16.94■□□□□ 0.3
CNEP1R1-203ENST00000458059 GPR137BO60478 399 aa16.94■□□□□ 0.3
CNEP1R1-203ENST00000458059 DKK1O94907 266 aa16.94■□□□□ 0.3
CNEP1R1-203ENST00000458059 OTX1P32242 354 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms