RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 SLC25A26Q70HW3 274 aa17.28■□□□□ 0.36
CPNE1-220ENST00000458038 BCDIN3DQ7Z5W3 292 aaKnown RBP17.28■□□□□ 0.36
CPNE1-220ENST00000458038 DNAAF1Q8NEP3 725 aa17.28■□□□□ 0.36
CPNE1-220ENST00000458038 PP6455Q8WZ26 134 aa17.28■□□□□ 0.36
CPNE1-220ENST00000458038 SLAMF9Q96A28 289 aa17.28■□□□□ 0.36
CPNE1-220ENST00000458038 BORCS8Q96FH0 119 aa17.28■□□□□ 0.36
CPNE1-220ENST00000458038 KRT84Q9NSB2 600 aa17.28■□□□□ 0.36
CPNE1-220ENST00000458038 WARS2Q9UGM6 360 aaKnown RBP17.28■□□□□ 0.36
CPNE1-220ENST00000458038 TMEM82A0PJX8 343 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 METTL15A6NJ78 407 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 ZAR1LA6NP61 321 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 MGST3O14880 152 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 GYG2O15488 501 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 HAND1O96004 215 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 OR2T7P0C7T2 308 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 ERP29P30040 261 aaKnown RBP17.27■□□□□ 0.36
CPNE1-220ENST00000458038 BRS3P32247 399 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 EDDM3AQ14507 147 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 GRK1Q15835 563 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 FOXB2Q5VYV0 432 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 C12orf73Q69YU5 71 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 Q6ZS46 218 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 TCF23Q7RTU1 214 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 CENPVQ7Z7K6 275 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-220ENST00000458038 RTN4RL2Q86UN3 420 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 CAPSLQ8WWF8 208 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 EMG1Q92979 244 aaKnown RBP17.27■□□□□ 0.36
CPNE1-220ENST00000458038 LIN7BQ9HAP6 207 aa17.27■□□□□ 0.36
CPNE1-220ENST00000458038 UBE2J1Q9Y385 318 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-220ENST00000458038 IGKV1-27A0A075B6S5 117 aa17.26■□□□□ 0.35
CPNE1-220ENST00000458038 MEX3AA1L020 520 aaKnown RBP17.26■□□□□ 0.35
CPNE1-220ENST00000458038 GABRR1P24046 479 aa17.26■□□□□ 0.35
CPNE1-220ENST00000458038 RBP2P50120 134 aa17.26■□□□□ 0.35
CPNE1-220ENST00000458038 ATP1B3P54709 279 aa17.26■□□□□ 0.35
CPNE1-220ENST00000458038 CDC42P60953 191 aa17.26■□□□□ 0.35
CPNE1-220ENST00000458038 ZNF91Q05481 1191 aa17.26■□□□□ 0.35
CPNE1-220ENST00000458038 ZNF146Q15072 292 aa17.26■□□□□ 0.35
CPNE1-220ENST00000458038 SPIN3Q5JUX0 258 aa17.26■□□□□ 0.35
CPNE1-220ENST00000458038 UTP4Q969X6 686 aaKnown RBP17.26■□□□□ 0.35
CPNE1-220ENST00000458038 DPM3Q9P2X0 92 aa17.26■□□□□ 0.35
CPNE1-220ENST00000458038 TRBV2A0A0J9YWF9 115 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 FUOMA2VDF0 154 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 DUS4LO95620 317 aaKnown RBP17.25■□□□□ 0.35
CPNE1-220ENST00000458038 PF4V1P10720 104 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 BDH1Q02338 343 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 ODF4Q2M2E3 257 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 FAM58AQ8N1B3 248 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 ZNF596Q8TC21 504 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 CREB3L1Q96BA8 519 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 IL4I1Q96RQ9 567 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 GAL3ST2Q9H3Q3 398 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 POMPQ9Y244 141 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 TSSC4Q9Y5U2 329 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-220ENST00000458038 NBEAL2Q6ZNJ1 2754 aa17.25■□□□□ 0.35
CPNE1-220ENST00000458038 COL7A1Q02388 2944 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 A0A1W2PQL4 384 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-220ENST00000458038 G3V2T6 193 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 IGHA1P01876 353 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 UBCP0CG48 685 aaKnown RBP17.24■□□□□ 0.35
CPNE1-220ENST00000458038 SLC35A2P78381 396 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 TMED1Q13445 227 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 SSX6Q7RTT6 188 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 TRAPPC6BQ86SZ2 158 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 ABHD12Q8N2K0 398 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 OR52N4Q8NGI2 321 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 OR4P4Q8NGL7 312 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 STMN2Q93045 179 aa17.24■□□□□ 0.35
CPNE1-220ENST00000458038 DNAH3Q8TD57 4116 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 M0R129 80 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 SH2D1BO14796 132 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 PSPNO60542 156 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 INMTO95050 263 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 PRKACBP22694 351 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 HTR1FP30939 366 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 CEACAM3P40198 252 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 P2RX3P56373 397 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 KDM4DQ6B0I6 523 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 HEPN1Q6WQI6 88 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 TPRX1Q8N7U7 411 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 CORO2AQ92828 525 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 RCC1LQ96I51 464 aaKnown RBP17.23■□□□□ 0.35
CPNE1-220ENST00000458038 TBX5Q99593 518 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 CHST6Q9GZX3 395 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 RHOFQ9HBH0 211 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 TAS2R3Q9NYW6 316 aa17.23■□□□□ 0.35
CPNE1-220ENST00000458038 TRGV10A0A0A0MS01 117 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 A0A1W2PRX2 142 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 TCRBV4S1A1TA0A5B7 111 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 LEUTXA8MZ59 168 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 CLIC3O95833 236 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 PF4P02776 101 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 IGLL1P15814 213 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 JUNBP17275 347 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-220ENST00000458038 EPHA2P29317 976 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 ATP6V1E1P36543 226 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 MTCP1P56278 107 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 TMEM95Q3KNT9 176 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 TMEM244Q5VVB8 128 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 UTS2BQ765I0 119 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 ZDHHC13Q8IUH4 622 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms