RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 NKX3-1Q99801 234 aaPredicted RBP8.35□□□□□ -1.07
RFX3-210ENST00000457373 ELL3Q9HB65 397 aaPredicted RBP8.35□□□□□ -1.07
RFX3-210ENST00000457373 HES4Q9HCC6 221 aa8.35□□□□□ -1.07
RFX3-210ENST00000457373 SLC25A10Q9UBX3 287 aaPredicted RBP8.35□□□□□ -1.07
RFX3-210ENST00000457373 ZNF222Q9UK12 451 aa8.35□□□□□ -1.07
RFX3-210ENST00000457373 BLOC1S6Q9UL45 172 aa8.35□□□□□ -1.07
RFX3-210ENST00000457373 LSM2Q9Y333 95 aaKnown RBP8.35□□□□□ -1.07
RFX3-210ENST00000457373 ANK3Q12955 4377 aaKnown RBP8.35□□□□□ -1.07
RFX3-210ENST00000457373 IGHV3OR16-10A0A075B7F0 116 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 IGKV1-12A0A0C4DH73 117 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 ZNF879B4DU55 563 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 RRP9O43818 475 aaKnown RBP8.34□□□□□ -1.07
RFX3-210ENST00000457373 ECDO95905 644 aaPredicted RBP8.34□□□□□ -1.07
RFX3-210ENST00000457373 KNG1P01042 644 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 IGKV1D-12P01611 117 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 BDKRB2P30411 391 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 TGFBR2P37173 567 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 FGF12P61328 243 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 ARF6P62330 175 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 PPP3R1P63098 170 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 BDH1Q02338 343 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 COL10A1Q03692 680 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 KISS1Q15726 138 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 CRIP3Q6Q6R5 217 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 PRSS48Q7RTY5 328 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 FAM58AQ8N1B3 248 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 TEX29Q8N6K0 151 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 PNLDC1Q8NA58 520 aaKnown RBP8.34□□□□□ -1.07
RFX3-210ENST00000457373 OR52N4Q8NGI2 321 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 DACT3Q96B18 629 aaPredicted RBP8.34□□□□□ -1.07
RFX3-210ENST00000457373 SDSLQ96GA7 329 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 PCGF1Q9BSM1 259 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 DCTN5Q9BTE1 182 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 TMED9Q9BVK6 235 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 CNTD2Q9H8S5 307 aa8.34□□□□□ -1.07
RFX3-210ENST00000457373 RBFOX1Q9NWB1 397 aaKnown RBP8.34□□□□□ -1.07
RFX3-210ENST00000457373 MEGF11A6BM72 1044 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 GABRPO00591 440 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 KDM4BO94953 1096 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 MAS1P04201 325 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 ALDOBP05062 364 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 LIPFP07098 398 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 SFTPBP07988 381 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 CHRM2P08172 466 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 PPIAL4GP0DN37 164 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 VSIG8P0DPA2 414 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 IGFBP3P17936 291 aaPredicted RBP8.33□□□□□ -1.08
RFX3-210ENST00000457373 DUSP1P28562 367 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 ZP1P60852 638 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 ACSM3Q53FZ2 586 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 DDI2Q5TDH0 399 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 LIPKQ5VXJ0 399 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 ZNF529Q6P280 563 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 FIP1L1Q6UN15 594 aaKnown RBP8.33□□□□□ -1.08
RFX3-210ENST00000457373 Q8IYB0 196 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 ZNF561Q8N587 486 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 ASCC1Q8N9N2 400 aaKnown RBP8.33□□□□□ -1.08
RFX3-210ENST00000457373 TNFAIP8L1Q8WVP5 186 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 UFD1Q92890 307 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 FAM192AQ9GZU8 254 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 NOX4Q9NPH5 578 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 ONECUT1Q9UBC0 465 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 IL36RNQ9UBH0 155 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 CKLFQ9UBR5 152 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 RPUSD1Q9UJJ7 312 aaKnown RBP8.33□□□□□ -1.08
RFX3-210ENST00000457373 ING4Q9UNL4 249 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 GSTK1Q9Y2Q3 226 aa8.33□□□□□ -1.08
RFX3-210ENST00000457373 TRAV8-7A0A075B6U6 113 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 TRBV5-7A0A0A0MS05 114 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 A0A1W2PQ09 198 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 PIN1P1O15428 100 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 GPX5O75715 221 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 TOX4O94842 621 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 HAND1O96004 215 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 TK1P04183 234 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 ZNF93P35789 620 aaPredicted RBP8.32□□□□□ -1.08
RFX3-210ENST00000457373 OR3A4PP47883 348 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 CAV3P56539 151 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 GABARAPL2P60520 117 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 SRSF2Q01130 221 aaKnown RBP8.32□□□□□ -1.08
RFX3-210ENST00000457373 SCN1BQ07699 218 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 INSL4Q14641 139 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 PDCD1Q15116 288 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 KLF17Q5JT82 389 aaPredicted RBP8.32□□□□□ -1.08
RFX3-210ENST00000457373 METTL11BQ5VVY1 283 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 SAXO1Q8IYX7 474 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 FAM185AQ8N0U4 392 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 MS4A15Q8N5U1 240 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 ZSCAN4Q8NAM6 433 aaPredicted RBP8.32□□□□□ -1.08
RFX3-210ENST00000457373 LY6G5BQ8NDX9 201 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 OR4M1Q8NGD0 313 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 OR10K1Q8NGX5 313 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 C22orf15Q8WYQ4 148 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 TMEM203Q969S6 136 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 CPNE2Q96FN4 548 aaPredicted RBP8.32□□□□□ -1.08
RFX3-210ENST00000457373 RCC1LQ96I51 464 aaKnown RBP8.32□□□□□ -1.08
RFX3-210ENST00000457373 WDFY2Q96P53 400 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 DERL3Q96Q80 235 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 NR1H4Q96RI1 486 aaPredicted RBP8.32□□□□□ -1.08
RFX3-210ENST00000457373 S100A13Q99584 98 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms