RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 LRRK1Q38SD2 2015 aa12.29□□□□□ -0.44
SYT1-204ENST00000457153 FAM58AQ8N1B3 248 aa12.29□□□□□ -0.44
SYT1-204ENST00000457153 MRPL24Q96A35 216 aaKnown RBP12.29□□□□□ -0.44
SYT1-204ENST00000457153 PMS2P1A4D2B8 440 aa12.29□□□□□ -0.44
SYT1-204ENST00000457153 PPYP01298 95 aa12.29□□□□□ -0.44
SYT1-204ENST00000457153 HLA-HP01893 362 aa12.29□□□□□ -0.44
SYT1-204ENST00000457153 GRPP07492 148 aa12.29□□□□□ -0.44
SYT1-204ENST00000457153 FCGR3AP08637 254 aa12.29□□□□□ -0.44
SYT1-204ENST00000457153 TAGLN2P37802 199 aaKnown RBP12.29□□□□□ -0.44
SYT1-204ENST00000457153 IDH3GP51553 393 aaPredicted RBP12.29□□□□□ -0.44
SYT1-204ENST00000457153 PRR13Q9NZ81 148 aa12.29□□□□□ -0.44
SYT1-204ENST00000457153 MPPED1O15442 326 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 MT-CO2P00403 227 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 CFHR1Q03591 330 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 C2orf68Q2NKX9 166 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 ZNF561Q8N587 486 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 RAB40CQ96S21 281 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A10PA6NDY2 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A18PA6NE21 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A16PA6NEW6 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A20PA6NIJ5 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A8PA6NJQ4 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A7PA6NKC0 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 ZNF724A8MTY0 619 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A22PA8MWA6 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A12PA8MX19 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A5PA8MXJ8 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A23PA8MXZ1 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A15PP0C7V4 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 SEC11BP0C7V7 166 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A13PP0C7W8 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A14PP0C7W9 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 FAM90A24PP0C7X0 464 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 TNFSF4P23510 183 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 ALDH3B1P43353 468 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 TAS2R30P59541 319 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 S100A12P80511 92 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 LAMP3Q9UQV4 416 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 LOC101059948A0A1B0GTJ6 334 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 TNFSF15O95150 251 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 CELA2AP08217 269 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 ZNF574Q6ZN55 896 aaPredicted RBP12.28□□□□□ -0.44
SYT1-204ENST00000457153 EIF4E3Q8N5X7 224 aaKnown RBP12.28□□□□□ -0.44
SYT1-204ENST00000457153 MAFAQ8NHW3 353 aaPredicted RBP12.28□□□□□ -0.44
SYT1-204ENST00000457153 MAGT1Q9H0U3 335 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 TRGV5A0A0B4J1U4 118 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 DUXBA0A1W2PPF3 345 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 H3BMH7 237 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 P2RY4P51582 365 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 PSG4Q00888 419 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 ZNF273Q14593 569 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 MRPL14Q6P1L8 145 aaKnown RBP12.28□□□□□ -0.44
SYT1-204ENST00000457153 NUFIP2Q7Z417 695 aaKnown RBP12.28□□□□□ -0.44
SYT1-204ENST00000457153 LINC00596Q86U02 117 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 OR5A2Q8NGI9 324 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 SARAFQ96BY9 339 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 MUCL1Q96DR8 90 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 Q96M66 194 aa12.28□□□□□ -0.44
SYT1-204ENST00000457153 ASCC3Q8N3C0 2202 aaKnown RBP12.28□□□□□ -0.44
SYT1-204ENST00000457153 A0A1W2PPV4 95 aa12.27□□□□□ -0.44
SYT1-204ENST00000457153 A8MXK9 166 aa12.27□□□□□ -0.44
SYT1-204ENST00000457153 SIRPB1O00241 398 aa12.27□□□□□ -0.44
SYT1-204ENST00000457153 WDR1O75083 606 aa12.27□□□□□ -0.44
SYT1-204ENST00000457153 IFNA4P05014 189 aa12.27□□□□□ -0.44
SYT1-204ENST00000457153 RBM11P57052 281 aaKnown RBP12.27□□□□□ -0.44
SYT1-204ENST00000457153 TM2D1Q9BX74 207 aa12.27□□□□□ -0.44
SYT1-204ENST00000457153 FN3KRPQ9HA64 309 aa12.27□□□□□ -0.44
SYT1-204ENST00000457153 GNG12Q9UBI6 72 aa12.27□□□□□ -0.44
SYT1-204ENST00000457153 V9GYS6 101 aa12.27□□□□□ -0.44
SYT1-204ENST00000457153 ARGFXA6NJG6 315 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 TRDCB7Z8K6 153 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 RPL36A-HNRNPH2H7BZ11 118 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 MT-CO3P00414 261 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 VDAC1P21796 283 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 CCL1P22362 96 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 PDCD1Q15116 288 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 UBE2V2Q15819 145 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 BRICD5Q6PL45 260 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 ZFP62Q8NB50 900 aaPredicted RBP12.27□□□□□ -0.45
SYT1-204ENST00000457153 ARID1AO14497 2285 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 LDLRAD4O15165 306 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 ACTL6AO96019 429 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 CTSSP25774 331 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 FAM3AP98173 230 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 BAXQ07812 192 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 DEFB123Q8N688 67 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 SRCAPQ6ZRS2 3230 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 RRP8O43159 456 aaKnown RBP12.27□□□□□ -0.45
SYT1-204ENST00000457153 OR2C1O95371 312 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 S100A8P05109 93 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 ZNF735P0CB33 412 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 GABRA2P47869 451 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 ADAMTS17Q8TE56 1095 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 ABHD3Q8WU67 409 aa12.27□□□□□ -0.45
SYT1-204ENST00000457153 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
SYT1-204ENST00000457153 DOCK9Q9BZ29 2069 aa12.26□□□□□ -0.45
SYT1-204ENST00000457153 ABCA7Q8IZY2 2146 aa12.26□□□□□ -0.45
SYT1-204ENST00000457153 LOC102723996A0A087X1L8 192 aa12.26□□□□□ -0.45
SYT1-204ENST00000457153 MEOX1P50221 254 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms