RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 NDUFB3O43676 98 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 ZNF737O75373 536 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 CDRT1O95170 752 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 PRKACAP17612 351 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 GATA3P23771 443 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 CALRP27797 417 aaKnown RBP11.71□□□□□ -0.53
SMPD4-215ENST00000457039 FGF9P31371 208 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-215ENST00000457039 MTNR1BP49286 362 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 CAV3P56539 151 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 FGF12P61328 243 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 IKZF1Q13422 519 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 LRRC10Q5BKY1 277 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 ZNF561Q8N587 486 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 JAGN1Q8N5M9 183 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 OR4D6Q8NGJ1 314 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 OR51T1Q8NGJ9 327 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 OR5V1Q9UGF6 321 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 INSIG2Q9Y5U4 225 aa11.71□□□□□ -0.53
SMPD4-215ENST00000457039 FN1P02751 2386 aaKnown RBP11.71□□□□□ -0.54
SMPD4-215ENST00000457039 LOC105371242A0A075B767 164 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 TRAV1-2A0A0B4J238 106 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 A0A0G2JMP0 313 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 A0A0X1KG70 313 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 INAFM1C9JVW0 142 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 GPR37O15354 613 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 HAND1O96004 215 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 CHRM2P08172 466 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 CD36P16671 472 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 BMXP51813 675 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 COL10A1Q03692 680 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 RSU1Q15404 277 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 CR1LQ2VPA4 569 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 C1orf100Q5SVJ3 147 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 DCAF12L2Q5VW00 463 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 CD276Q5ZPR3 534 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 GLT8D1Q68CQ7 371 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
SMPD4-215ENST00000457039 BTN2A1Q7KYR7 527 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 OR4M2Q8NGB6 313 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 OR10K1Q8NGX5 313 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 TBC1D15Q8TC07 691 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 RAB40AQ8WXH6 277 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 ST8SIA4Q92187 359 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 FOXRED1Q96CU9 486 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-215ENST00000457039 TMPRSS13Q9BYE2 586 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 SLITRK2Q9H156 845 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 METTL9Q9H1A3 318 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 OR51E2Q9H255 320 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 VCX3AQ9NNX9 186 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 TXNL4BQ9NX01 149 aaKnown RBP11.7□□□□□ -0.54
SMPD4-215ENST00000457039 SLC25A10Q9UBX3 287 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-215ENST00000457039 ING4Q9UNL4 249 aa11.7□□□□□ -0.54
SMPD4-215ENST00000457039 MRPS28Q9Y2Q9 187 aaKnown RBP11.7□□□□□ -0.54
SMPD4-215ENST00000457039 SONP18583 2426 aaKnown RBP11.69□□□□□ -0.54
SMPD4-215ENST00000457039 DOCK11Q5JSL3 2073 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 KIR2DS1A0A191URI9 304 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 A0A1W2PP11 408 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 TMEM82A0PJX8 343 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 J3QLI3 93 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 K7N7A8 449 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 ZNF780AO75290 641 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-215ENST00000457039 ECDO95905 644 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-215ENST00000457039 AVPP01185 164 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 LMO1P25800 156 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 DUSP1P28562 367 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 SNU13P55769 128 aaKnown RBP11.69□□□□□ -0.54
SMPD4-215ENST00000457039 PAX8Q06710 450 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 NHLRC3Q5JS37 347 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 C22orf42Q6IC83 251 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 Q6P435 159 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 GLIPR1L1Q6UWM5 242 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 C17orf107Q6ZR85 190 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 C1orf229Q6ZS94 237 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-215ENST00000457039 LY6G5BQ8NDX9 201 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 TMEM185AQ8NFB2 350 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 C8orf46Q8TAG6 207 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 YIPF6Q96EC8 236 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 NUDT16L1Q9BRJ7 211 aaKnown RBP11.69□□□□□ -0.54
SMPD4-215ENST00000457039 DCTN5Q9BTE1 182 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 SHARPINQ9H0F6 387 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 FAM234AQ9H0X4 552 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 ELL3Q9HB65 397 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-215ENST00000457039 OPN4Q9UHM6 478 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 RPUSD1Q9UJJ7 312 aaKnown RBP11.69□□□□□ -0.54
SMPD4-215ENST00000457039 GSTK1Q9Y2Q3 226 aa11.69□□□□□ -0.54
SMPD4-215ENST00000457039 AK6Q9Y3D8 172 aaKnown RBP11.69□□□□□ -0.54
SMPD4-215ENST00000457039 SLC22A1O15245 554 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 ENSAO43768 121 aaKnown RBP11.68□□□□□ -0.54
SMPD4-215ENST00000457039 PSPNO60542 156 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 HTR3BO95264 441 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 OR2H2O95918 312 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 TK1P04183 234 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 GADD45AP24522 165 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 IL13RA2Q14627 380 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 FAM120AOSQ5T036 256 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 AWAT2Q6E213 333 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 FAHD2BQ6P2I3 314 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-215ENST00000457039 SLC25A28Q96A46 364 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 FAHD2AQ96GK7 314 aa11.68□□□□□ -0.54
SMPD4-215ENST00000457039 S100A13Q99584 98 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms