RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 MXD1Q05195 221 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 RSU1Q15404 277 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 HES5Q5TA89 166 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 ATPAF1Q5TC12 328 aaPredicted RBP11.67□□□□□ -0.54
TIMP1-205ENST00000456754 WDR25Q64LD2 544 aaPredicted RBP11.67□□□□□ -0.54
TIMP1-205ENST00000456754 CYB5R2Q6BCY4 276 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 CLEC9AQ6UXN8 241 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 SLC16A12Q6ZSM3 486 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 NKAIN3Q8N8D7 197 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 TMEM104Q8NE00 496 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 ST8SIA4Q92187 359 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 FAM46BQ96A09 425 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 C12orf43Q96C57 262 aaKnown RBP11.67□□□□□ -0.54
TIMP1-205ENST00000456754 SSBP3Q9BWW4 388 aaPredicted RBP11.67□□□□□ -0.54
TIMP1-205ENST00000456754 SLITRK2Q9H156 845 aa11.67□□□□□ -0.54
TIMP1-205ENST00000456754 TRAV1-2A0A0B4J238 106 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 SIGLEC5O15389 551 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 CD5LO43866 347 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 AIREO43918 545 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 PSPNO60542 156 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 MSMBP08118 114 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 SLC2A2P11168 524 aaPredicted RBP11.66□□□□□ -0.54
TIMP1-205ENST00000456754 FOSL1P15407 271 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 GALP22466 123 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 SDC2P34741 201 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 GZMKP49863 264 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 FGF12P61328 243 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 NCS1P62166 190 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 GNB2P62879 340 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 SCN1BQ07699 218 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 ESCO2Q56NI9 601 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 C1orf100Q5SVJ3 147 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 GLT8D1Q68CQ7 371 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 FAM166AQ6J272 317 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 Q6P435 159 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 RTN4RL2Q86UN3 420 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 LINC01356Q8N9X3 169 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 PNLDC1Q8NA58 520 aaKnown RBP11.66□□□□□ -0.54
TIMP1-205ENST00000456754 TMEM185AQ8NFB2 350 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 SDSLQ96GA7 329 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 METTL9Q9H1A3 318 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 YAE1D1Q9NRH1 226 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 KAAG1Q9UBP8 84 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 CLN8Q9UBY8 286 aa11.66□□□□□ -0.54
TIMP1-205ENST00000456754 MTORP42345 2549 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 MEGF11A6BM72 1044 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 NKX6-3A6NJ46 265 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 B4DSR2 109 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 HSPB6O14558 160 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 SLC22A1O15245 554 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 ZNF737O75373 536 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 OR2H2O95918 312 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 MYL9P24844 172 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 MTNR1BP49286 362 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 IL13RA1P78552 427 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 PAX2Q02962 417 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 UNC119Q13432 240 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 KCNJ8Q15842 424 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 GPR107Q5VW38 600 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 ELP2Q6IA86 826 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 C17orf107Q6ZR85 190 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 IL17RELQ6ZVW7 336 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 NLRC3Q7RTR2 1065 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 OR4S1Q8NGB4 309 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 UQCC2Q9BRT2 126 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 CHST6Q9GZX3 395 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 SLC25A10Q9UBX3 287 aaPredicted RBP11.65□□□□□ -0.54
TIMP1-205ENST00000456754 V9GY05 133 aa11.65□□□□□ -0.54
TIMP1-205ENST00000456754 SVEP1Q4LDE5 3571 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 FN1P02751 2386 aaKnown RBP11.64□□□□□ -0.55
TIMP1-205ENST00000456754 DSCAML1Q8TD84 2053 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 A8MXK9 166 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 SLC17A2O00624 439 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 GEMIN2O14893 280 aaKnown RBP11.64□□□□□ -0.55
TIMP1-205ENST00000456754 NDUFA2O43678 99 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 AVPP01185 164 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 HEXAP06865 529 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 VSIG8P0DPA2 414 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 NDUFB7P17568 137 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 RAB3BP20337 219 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 HTR2CP28335 458 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 CAPZA1P52907 286 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 VBP1P61758 197 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 QRFPP83859 136 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 PRB3Q04118 309 aaPredicted RBP11.64□□□□□ -0.55
TIMP1-205ENST00000456754 ZNF146Q15072 292 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 BRICD5Q6PL45 260 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 BTN2A1Q7KYR7 527 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 SLC36A1Q7Z2H8 476 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 BIVMQ86UB2 503 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 CDH26Q8IXH8 852 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 Q8IYB0 196 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 OSR2Q8N2R0 312 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 TPRX1Q8N7U7 411 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 ASCC1Q8N9N2 400 aaKnown RBP11.64□□□□□ -0.55
TIMP1-205ENST00000456754 Q8NFD4 153 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 OR4M1Q8NGD0 313 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 TBC1D15Q8TC07 691 aa11.64□□□□□ -0.55
TIMP1-205ENST00000456754 H1FXQ92522 213 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms