RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PPP1R35Q8TAP8 253 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 SMIM19Q96E16 107 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 METTL8Q9H825 291 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 MDFIC2A0A1B0GVS7 189 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 A0A1W2PRD5 423 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 A0A1W2PRF3 423 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 A0A1W2PRM7 423 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 K7N7A8 449 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 SH2D1BO14796 132 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 GABRR1P24046 479 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 DUSP1P28562 367 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 C6orf141Q5SZD1 244 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 NCR3LG1Q68D85 454 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 ZFP41Q8N8Y5 198 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 FBLIM1Q8WUP2 373 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 GHSRQ92847 366 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 MYDGFQ969H8 173 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 TMEM106AQ96A25 262 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 SNX22Q96L94 193 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 NOX4Q9NPH5 578 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 TNFRSF19Q9NS68 423 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 C19orf12Q9NSK7 152 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 TAS2R4Q9NYW5 299 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 GSTK1Q9Y2Q3 226 aa14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 SIRT4Q9Y6E7 314 aaPredicted RBP14.86□□□□□ -0.03
PDLIM2-215ENST00000456545 PNMA8CA0A1B0GUJ8 204 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 C21orf33P30042 268 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 PRB3Q04118 309 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 SCN1BQ07699 218 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 SPIN3Q5JUX0 258 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 TMEM200BQ69YZ2 307 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 LAIR2Q6ISS4 152 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 SAXO1Q8IYX7 474 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 Q8N7P7 452 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 RHOFQ9HBH0 211 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 HMG20AQ9NP66 347 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 EXOSC4Q9NPD3 245 aaKnown RBP14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 CKLFQ9UBR5 152 aa14.85□□□□□ -0.03
PDLIM2-215ENST00000456545 COL6A5A8TX70 2615 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 HOXA3O43365 443 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 LALBAP00709 142 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 WNT4P56705 351 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 EDDM3AQ14507 147 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 SLC9A3R2Q15599 337 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 GRK1Q15835 563 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 YIF1BQ5BJH7 314 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 DMKNQ6E0U4 476 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 METAP1DQ6UB28 335 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 RGP1Q92546 391 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 S100A13Q99584 98 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 FAM192AQ9GZU8 254 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 HEXA-AS1Q9H8Q6 139 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 SF3B6Q9Y3B4 125 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 TPRKBQ9Y3C4 175 aa14.84□□□□□ -0.03
PDLIM2-215ENST00000456545 RNASEK-C17orf49H0YIS7 233 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 SIRPB1O00241 398 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 KDM4BO94953 1096 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 PAHP00439 452 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 CELP19835 753 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 HSPA13P48723 471 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 DLX1P56177 255 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 KLRD1Q13241 179 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 TUSC1Q2TAM9 212 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 Q6YL49 198 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 RNF144BQ7Z419 303 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 OR8H2Q8N162 312 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 NANOGP1Q8N7R0 232 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 RPS4Y2Q8TD47 263 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 TNFAIP8L1Q8WVP5 186 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 CHST6Q9GZX3 395 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 SEBOXQ9HB31 216 aaPredicted RBP14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 TMEM138Q9NPI0 162 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 IL36RNQ9UBH0 155 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 ING4Q9UNL4 249 aa14.83□□□□□ -0.04
PDLIM2-215ENST00000456545 IGKV1-12A0A0C4DH73 117 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 A0A0U1RQK1 487 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 MEIOCA2RUB1 952 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 NPFFO15130 113 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 ZNF737O75373 536 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 IGKV1D-12P01611 117 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 CRYBA1P05813 215 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 CDK1P06493 297 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 RNASE1P07998 156 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 ZNF44P15621 663 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 BDKRB2P30411 391 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 BMXP51813 675 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 UBE2E1P51965 193 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 ZNF146Q15072 292 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 RSU1Q15404 277 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 Q499Y3 187 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 IZUMO2Q6UXV1 221 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 OR52N4Q8NGI2 321 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 OR51A2Q8NGJ7 313 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 OR13C5Q8NGS8 318 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 NR1H4Q96RI1 486 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 MND1Q9BWT6 205 aa14.82□□□□□ -0.04
PDLIM2-215ENST00000456545 hADV38S2A0JD32 116 aa14.81□□□□□ -0.04
PDLIM2-215ENST00000456545 TMEM82A0PJX8 343 aa14.81□□□□□ -0.04
PDLIM2-215ENST00000456545 TMEM89A2RUT3 159 aa14.81□□□□□ -0.04
PDLIM2-215ENST00000456545 FUOMA2VDF0 154 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms