RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ERVK13-1Q9NX77 482 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 MYRFQ9Y2G1 1151 aa14.56□□□□□ -0.08
MSH6-207ENST00000456246 hADV38S2A0JD32 116 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 TSPAN9O75954 239 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 ALX3O95076 343 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 BAG2O95816 211 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 ZNF728P0DKX0 622 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 PIPP12273 146 aaPredicted RBP14.55□□□□□ -0.08
MSH6-207ENST00000456246 GBX2P52951 348 aaPredicted RBP14.55□□□□□ -0.08
MSH6-207ENST00000456246 PDZK1IP1Q13113 114 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 LRRC75BQ2VPJ9 315 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 BRICD5Q6PL45 260 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 DTX3Q8N9I9 347 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 OR13D1Q8NGV5 346 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 OR5AK2Q8NH90 309 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 CPNE2Q96FN4 548 aaPredicted RBP14.55□□□□□ -0.08
MSH6-207ENST00000456246 JAM3Q9BX67 310 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 ZCCHC4Q9H5U6 513 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 C16orf95Q9H693 158 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 RAB18Q9NP72 206 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 RBFOX1Q9NWB1 397 aaKnown RBP14.55□□□□□ -0.08
MSH6-207ENST00000456246 AASSQ9UDR5 926 aa14.55□□□□□ -0.08
MSH6-207ENST00000456246 IRGMA1A4Y4 181 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 H3BUX3 64 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 CLPXO76031 633 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 PRKACAP17612 351 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 BCL3P20749 454 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 DLX6P56179 175 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 LIAT1Q6ZQX7 453 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 Q6ZSV7 163 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 SERPINA12Q8IW75 414 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 SAXO1Q8IYX7 474 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 OR51A4Q8NGJ6 313 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 OR52I1Q8NGK6 324 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 OR5D14Q8NGL3 314 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 OR13C9Q8NGT0 318 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 OR10AC1Q8NH08 325 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 FOXRED1Q96CU9 486 aaPredicted RBP14.54□□□□□ -0.08
MSH6-207ENST00000456246 ZNF714Q96N38 554 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 SSX3Q99909 188 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 CITED1Q99966 193 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 AMBNQ9NP70 447 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 TBL2Q9Y4P3 447 aaKnown RBP14.54□□□□□ -0.08
MSH6-207ENST00000456246 LINC00312Q9Y6C7 94 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 DSCAML1Q8TD84 2053 aa14.54□□□□□ -0.08
MSH6-207ENST00000456246 TMEM82A0PJX8 343 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 MGST3O14880 152 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 TIMM23O14925 209 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 INMTO95050 263 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 ZFPL1O95159 310 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 GABRR1P24046 479 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 COX7A1P24310 79 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 ERP29P30040 261 aaKnown RBP14.53□□□□□ -0.08
MSH6-207ENST00000456246 NPBWR2P48146 333 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 PROK1P58294 105 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 GRK1Q15835 563 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 ZNF782Q6ZMW2 699 aaPredicted RBP14.53□□□□□ -0.08
MSH6-207ENST00000456246 PARP16Q8N5Y8 322 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 APH1BQ8WW43 257 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 ZNF649Q9BS31 505 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 ISG20L2Q9H9L3 353 aaKnown RBP14.53□□□□□ -0.08
MSH6-207ENST00000456246 HMG20AQ9NP66 347 aa14.53□□□□□ -0.08
MSH6-207ENST00000456246 FGF20Q9NP95 211 aaPredicted RBP14.53□□□□□ -0.08
MSH6-207ENST00000456246 PKD1L1Q8TDX9 2849 aa14.52□□□□□ -0.08
MSH6-207ENST00000456246 FUOMA2VDF0 154 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 SH2D1BO14796 132 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 SULT1B1O43704 296 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 KDM4BO94953 1096 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 IGHV1-8P0DP01 117 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 DCKP27707 260 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 EDDM3AQ14507 147 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 CCDC58Q4VC31 144 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 C11orf88Q6PI97 169 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 TREML4Q6UXN2 200 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 PACRGLQ8N7B6 248 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 OR11H6Q8NGC7 330 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 TSEN15Q8WW01 171 aaKnown RBP14.52□□□□□ -0.09
MSH6-207ENST00000456246 AJUBAQ96IF1 538 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 EXOSC4Q9NPD3 245 aaKnown RBP14.52□□□□□ -0.09
MSH6-207ENST00000456246 DHDHQ9UQ10 334 aa14.52□□□□□ -0.09
MSH6-207ENST00000456246 FAM90A8PA6NJQ4 464 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 VGLL3A8MV65 326 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 M0QZ24 198 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 HCKP08631 526 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 BMXP51813 675 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 P2RX3P56373 397 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 TTC23Q5W5X9 447 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 ZNF626Q68DY1 528 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 TMPRSS11AQ6ZMR5 421 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 CHST4Q8NCG5 386 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 SETD9Q8NE22 299 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 C17orf50Q8WW18 174 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 RFT1Q96AA3 541 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 MALSU1Q96EH3 234 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 CDCA4Q9BXL8 241 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 PPA2Q9H2U2 334 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 RANBP3Q9H6Z4 567 aaPredicted RBP14.51□□□□□ -0.09
MSH6-207ENST00000456246 IL36RNQ9UBH0 155 aa14.51□□□□□ -0.09
MSH6-207ENST00000456246 UBE2J1Q9Y385 318 aaPredicted RBP14.51□□□□□ -0.09
MSH6-207ENST00000456246 ODF3BA8MYP8 253 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms