RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 CD177Q8N6Q3 437 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 ASCC1Q8N9N2 400 aaKnown RBP10.58□□□□□ -0.72
TREX1-203ENST00000456089 ZSCAN4Q8NAM6 433 aaPredicted RBP10.58□□□□□ -0.72
TREX1-203ENST00000456089 OR51A4Q8NGJ6 313 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 OR13C9Q8NGT0 318 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 CPNE2Q96FN4 548 aaPredicted RBP10.58□□□□□ -0.72
TREX1-203ENST00000456089 TMEM80Q96HE8 168 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 PDCD1LG2Q9BQ51 273 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 JAM3Q9BX67 310 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 ZCCHC4Q9H5U6 513 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 METTL8Q9H825 291 aaKnown RBP10.58□□□□□ -0.72
TREX1-203ENST00000456089 HES4Q9HCC6 221 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 ZNRD1Q9P1U0 126 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 PCDHGB5Q9Y5G0 923 aa10.58□□□□□ -0.72
TREX1-203ENST00000456089 IGKV1-27A0A075B6S5 117 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 EFCAB10A6NFE3 127 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 E9PI62 339 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 M0R1W7 72 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 CASQ2O14958 399 aaPredicted RBP10.57□□□□□ -0.72
TREX1-203ENST00000456089 NPFFO15130 113 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 ZFPL1O95159 310 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 TSPAN15O95858 294 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 CD2P06729 351 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 LIMS3P0CW19 117 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 LIMS4P0CW20 117 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 ETV1P50549 477 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 RPL31P62899 125 aaKnown RBP10.57□□□□□ -0.72
TREX1-203ENST00000456089 COL10A1Q03692 680 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 SLC34A1Q06495 639 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 CCDC58Q4VC31 144 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 NCR3LG1Q68D85 454 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 RPL22L1Q6P5R6 122 aaKnown RBP10.57□□□□□ -0.72
TREX1-203ENST00000456089 C1orf122Q6ZSJ8 110 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 GDPD3Q7L5L3 318 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 OR5D13Q8NGL4 314 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 OR10AC1Q8NH08 325 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 C17orf50Q8WW18 174 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 RFT1Q96AA3 541 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 FAM234AQ9H0X4 552 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 MTCH1Q9NZJ7 389 aa10.57□□□□□ -0.72
TREX1-203ENST00000456089 DIMT1Q9UNQ2 313 aaKnown RBP10.57□□□□□ -0.72
TREX1-203ENST00000456089 IGKV1-9A0A0C4DH69 117 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 MEIOCA2RUB1 952 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 H0YHG0 523 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 PAHP00439 452 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 TK1P04183 234 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 FBP1P09467 338 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 PRKACAP17612 351 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 RAB3AP20336 220 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 SAA4P35542 130 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 GTF2A1P52655 376 aaPredicted RBP10.56□□□□□ -0.72
TREX1-203ENST00000456089 PROK1P58294 105 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 ERVK11-1P61568 191 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 OR2G6Q5TZ20 316 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
TREX1-203ENST00000456089 FAM58AQ8N1B3 248 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 STX19Q8N4C7 294 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 OR4M1Q8NGD0 313 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 GPR148Q8TDV2 347 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 TNFRSF14Q92956 283 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 ZNF649Q9BS31 505 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 DPAGT1Q9H3H5 408 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 BABAM2Q9NXR7 383 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 DSCAML1Q8TD84 2053 aa10.56□□□□□ -0.72
TREX1-203ENST00000456089 K7N7A8 449 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 M0QZ24 198 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 SULT1B1O43704 296 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 HAND1O96004 215 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 MT-ND2P03891 347 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 TMEM225BP0DP42 221 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 BCL3P20749 454 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 GABRR1P24046 479 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 SOX2P48431 317 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 SNU13P55769 128 aaKnown RBP10.55□□□□□ -0.72
TREX1-203ENST00000456089 EDDM3BP56851 147 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 ST3GAL4Q11206 333 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 CDK5R1Q15078 307 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 METAP1DQ6UB28 335 aaPredicted RBP10.55□□□□□ -0.72
TREX1-203ENST00000456089 GDPGP1Q6ZNW5 385 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 SATL1Q86VE3 508 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 C1QL4Q86Z23 238 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 BPIFB6Q8NFQ5 453 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 OR5D18Q8NGL1 313 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 PPP1R35Q8TAP8 253 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 GGHQ92820 318 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 SPACA5Q96QH8 159 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 GPER1Q99527 375 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 VCX3BQ9H321 246 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 TCF7L1Q9HCS4 588 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 C19orf12Q9NSK7 152 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 RBFOX1Q9NWB1 397 aaKnown RBP10.55□□□□□ -0.72
TREX1-203ENST00000456089 VPREB3Q9UKI3 123 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 SIGLEC9Q9Y336 463 aa10.55□□□□□ -0.72
TREX1-203ENST00000456089 SF3B6Q9Y3B4 125 aaKnown RBP10.55□□□□□ -0.72
TREX1-203ENST00000456089 BTBD17A6NE02 478 aa10.54□□□□□ -0.72
TREX1-203ENST00000456089 F8VVB4 439 aa10.54□□□□□ -0.72
TREX1-203ENST00000456089 F8VWA3 439 aa10.54□□□□□ -0.72
TREX1-203ENST00000456089 SH2D1BO14796 132 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms