RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OR8B4Q96RC9 309 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 NEURL2Q9BR09 285 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 AMDHD2Q9Y303 409 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 C7orf71A4D174 169 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 LMX1BO60663 402 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 S1PR2O95136 353 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 ASIPP42127 132 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 PGGT1BP53609 377 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 MLF1P58340 268 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 LRRC75BQ2VPJ9 315 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 LEMD1Q68G75 181 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 RASL11AQ6T310 242 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 UBTD1Q9HAC8 227 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 GOLGA2P5Q9HBQ8 144 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 OSGIN2Q9Y236 505 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 CCL22O00626 93 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 PRKRAO75569 313 aaKnown RBP4.68□□□□□ -1.66
CSMD3-204ENST00000455883 FAM87AP0C7U9 286 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 CDC34P49427 236 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-204ENST00000455883 OR8G2PQ6IF36 304 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 GRASPQ7Z6J2 395 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-204ENST00000455883 TP53I13Q8NBR0 393 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-204ENST00000455883 VN1R2Q8NFZ6 395 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 OR10G4Q8NGN3 311 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF384Q8TF68 577 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 ROBO4Q8WZ75 1007 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 RCL1Q9Y2P8 373 aaKnown RBP4.68□□□□□ -1.66
CSMD3-204ENST00000455883 TMIGD3P0DMS9 266 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-204ENST00000455883 ACP1P24666 158 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 HTR1DP28221 377 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 RACK1P63244 317 aaKnown RBP4.68□□□□□ -1.66
CSMD3-204ENST00000455883 SLC46A2Q9BY10 475 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 MRPS18AQ9NVS2 196 aaKnown RBP4.68□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM242Q9NWH2 141 aa4.68□□□□□ -1.66
CSMD3-204ENST00000455883 A0A0B4J2E0 115 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 A0A1B0GX12 115 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 M0R082 166 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 TIMM8AO60220 97 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 ARSDP51689 593 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 MVDP53602 400 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 GABRA6Q16445 453 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 VASH2Q86V25 355 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CALHM1Q8IU99 346 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CLECL1Q8IZS7 167 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 TTC9BQ8N6N2 239 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PMEPA1Q969W9 287 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 OR6C1Q96RD1 312 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SLC25A18Q9H1K4 315 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 P4HTMQ9NXG6 502 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PDCD6O75340 191 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CFIP05156 583 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PRR35P0CG20 571 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 RPL30P62888 115 aaKnown RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SPRED3Q2MJR0 410 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 TCTN3Q6NUS6 607 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 LRTM2Q8N967 370 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 VN1R17PQ8TDU5 208 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 GPR78Q96P69 363 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 MENTQ9BUN1 341 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SLC22A13Q9Y226 551 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 A0A1B0GTH9 108 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 IDSB3KWA1 339 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 GCM2O75603 506 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 OR2A4O95047 310 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 NGFRP08138 427 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 COX5BP10606 129 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SNRPBP14678 240 aaKnown RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CTSSP25774 331 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PPP1CCP36873 323 aaKnown RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SQSTM1Q13501 440 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM52BQ4KMG9 183 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 C2orf27AQ580R0 203 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 TXNRD3NBQ6F5E7 133 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 MED25Q71SY5 747 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CLEC4CQ8WTT0 213 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 OR2A7Q96R45 310 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 GLIPR2Q9H4G4 154 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 FAM221AA4D161 298 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 ATF1P18846 271 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 KIR3DL2P43630 455 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 DHRS7BQ6IAN0 325 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 FIZ1Q96SL8 496 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SDF2Q99470 211 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF2Q9BSG1 426 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 ELOVL1Q9BW60 279 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CREBZFQ9NS37 354 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 DAPP1Q9UN19 280 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 ATG2AQ2TAZ0 1938 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 C11orf94C9JXX5 98 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 AQP7O14520 342 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PRR14Q9BWN1 585 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SLCO1C1Q9NYB5 712 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 A0A0U1RQV5 110 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF737O75373 536 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CTAG2O75638 210 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CD79AP11912 226 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 KIR2DL1P43626 348 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 KIR2DL2P43627 348 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PRRX1P54821 245 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 TMPRSS3P57727 454 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms