RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ZNF696Q9H7X3 374 aa17.3■□□□□ 0.36
HMGB3-205ENST00000455596 IL36RNQ9UBH0 155 aa17.3■□□□□ 0.36
HMGB3-205ENST00000455596 GLS2Q9UI32 602 aa17.3■□□□□ 0.36
HMGB3-205ENST00000455596 C17orf98A8MV24 154 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 E9PI62 339 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 WBP4O75554 376 aaKnown RBP17.29■□□□□ 0.36
HMGB3-205ENST00000455596 ZFPL1O95159 310 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 PEX2P28328 305 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 ZNF146Q15072 292 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 SMN1Q16637 294 aaKnown RBP17.29■□□□□ 0.36
HMGB3-205ENST00000455596 LRRC36Q1X8D7 754 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 SPIN3Q5JUX0 258 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 PRR31Q5SQ13 230 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 DHRS7BQ6IAN0 325 aaPredicted RBP17.29■□□□□ 0.36
HMGB3-205ENST00000455596 SERPINA12Q8IW75 414 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 WFDC12Q8WWY7 111 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 JAM3Q9BX67 310 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 FGF20Q9NP95 211 aaPredicted RBP17.29■□□□□ 0.36
HMGB3-205ENST00000455596 C8orf4Q9NR00 106 aa17.29■□□□□ 0.36
HMGB3-205ENST00000455596 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.29■□□□□ 0.36
HMGB3-205ENST00000455596 TMEM82A0PJX8 343 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 COX7A1P24310 79 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 DUSP1P28562 367 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 DLX6P56179 175 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 LGALS4P56470 323 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 MEF2CQ06413 473 aaPredicted RBP17.28■□□□□ 0.36
HMGB3-205ENST00000455596 EDDM3AQ14507 147 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 ZNF691Q5VV52 312 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 ZNF782Q6ZMW2 699 aaPredicted RBP17.28■□□□□ 0.36
HMGB3-205ENST00000455596 ZSCAN4Q8NAM6 433 aaPredicted RBP17.28■□□□□ 0.36
HMGB3-205ENST00000455596 OR5D14Q8NGL3 314 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 TSEN15Q8WW01 171 aaKnown RBP17.28■□□□□ 0.36
HMGB3-205ENST00000455596 C17orf50Q8WW18 174 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 SPACA5Q96QH8 159 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 PDCD1LG2Q9BQ51 273 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 MEGF9Q9H1U4 602 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 DHDHQ9UQ10 334 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 RNF114Q9Y508 228 aa17.28■□□□□ 0.36
HMGB3-205ENST00000455596 IRGMA1A4Y4 181 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 SULT1B1O43704 296 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 ALX3O95076 343 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 CLIC3O95833 236 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 RBP4P02753 201 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 HCKP08631 526 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 LIMS3P0CW19 117 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 LIMS4P0CW20 117 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 ZNF728P0DKX0 622 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 CALCBP10092 127 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 GABRR1P24046 479 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 TGFBR2P37173 567 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 BMXP51813 675 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 SNU13P55769 128 aaKnown RBP17.27■□□□□ 0.36
HMGB3-205ENST00000455596 GRK1Q15835 563 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 TTC23Q5W5X9 447 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 PARP16Q8N5Y8 322 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 PACRGLQ8N7B6 248 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 OR52N4Q8NGI2 321 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 OR5D18Q8NGL1 313 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 PPP1R35Q8TAP8 253 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 CNIH3Q8TBE1 160 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 SSX3Q99909 188 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 CHST6Q9GZX3 395 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 RHOFQ9HBH0 211 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 HMG20AQ9NP66 347 aa17.27■□□□□ 0.36
HMGB3-205ENST00000455596 IGKV1-12A0A0C4DH73 117 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 hADV38S2A0JD32 116 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 MEX3AA1L020 520 aaKnown RBP17.26■□□□□ 0.35
HMGB3-205ENST00000455596 H3BUX3 64 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 SH2D1BO14796 132 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 PSPNO60542 156 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 KDM4BO94953 1096 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 IGKV1D-12P01611 117 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 DCKP27707 260 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 LRRC75BQ2VPJ9 315 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 Q6ZSV7 163 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 SAXO1Q8IYX7 474 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 SETD9Q8NE22 299 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 LINC01006Q8NI28 216 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 CYGBQ8WWM9 190 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 AJUBAQ96IF1 538 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 ZNF714Q96N38 554 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 EXOSC4Q9NPD3 245 aaKnown RBP17.26■□□□□ 0.35
HMGB3-205ENST00000455596 GSTK1Q9Y2Q3 226 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 PCDHGB5Q9Y5G0 923 aa17.26■□□□□ 0.35
HMGB3-205ENST00000455596 MGST3O14880 152 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 IGHV1-8P0DP01 117 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 ETV1P50549 477 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 GTF2A1P52655 376 aaPredicted RBP17.25■□□□□ 0.35
HMGB3-205ENST00000455596 RCN1Q15293 331 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 CCDC58Q4VC31 144 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 TMPRSS11AQ6ZMR5 421 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 TCF23Q7RTU1 214 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 RNF144BQ7Z419 303 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 DHRSXQ8N5I4 330 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 OR4S1Q8NGB4 309 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 OR13D1Q8NGV5 346 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 LINC00312Q9Y6C7 94 aa17.25■□□□□ 0.35
HMGB3-205ENST00000455596 SIRPB1O00241 398 aa17.24■□□□□ 0.35
HMGB3-205ENST00000455596 TMEM225BP0DP42 221 aa17.24■□□□□ 0.35
HMGB3-205ENST00000455596 SRSF4Q08170 494 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms