RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CALHM1Q8IU99 346 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 CCDC36Q8IYA8 594 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 MRPL24Q96A35 216 aaKnown RBP10.4□□□□□ -0.74
SMPD4-213ENST00000454468 UFSP2Q9NUQ7 469 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 C1orf123Q9NWV4 160 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 STARD10Q9Y365 291 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 FAM96BQ9Y3D0 163 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 IGLV3-32A0A0A0MS00 114 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 MFNGO00587 321 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 BCL2L11O43521 198 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 CD63P08962 238 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 RCC1P18754 421 aaPredicted RBP10.4□□□□□ -0.75
SMPD4-213ENST00000454468 PRDX4Q13162 271 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 RSPO1Q2MKA7 263 aaPredicted RBP10.4□□□□□ -0.75
SMPD4-213ENST00000454468 ADPRHL1Q8NDY3 354 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 CPEB3Q8NE35 698 aaKnown RBP10.4□□□□□ -0.75
SMPD4-213ENST00000454468 PTX4Q96A99 478 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 INTS12Q96CB8 462 aaKnown RBP10.4□□□□□ -0.75
SMPD4-213ENST00000454468 ALX4Q9H161 411 aaPredicted RBP10.4□□□□□ -0.75
SMPD4-213ENST00000454468 FN3KRPQ9HA64 309 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 NECAP2Q9NVZ3 263 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 PRSS50Q9UI38 385 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 ANXA10Q9UJ72 324 aa10.4□□□□□ -0.75
SMPD4-213ENST00000454468 TRBV23-1A0A0A0MS06 115 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 ZNF816-ZNF321PA0A0X1KG74 233 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 ANKRD30BLA7E2S9 258 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 SP9P0CG40 484 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 ZNF169Q14929 603 aaPredicted RBP10.39□□□□□ -0.75
SMPD4-213ENST00000454468 EMG1Q92979 244 aaKnown RBP10.39□□□□□ -0.75
SMPD4-213ENST00000454468 TMEM54Q969K7 222 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 GPR132Q9UNW8 380 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 CEP295Q9C0D2 2601 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 COL6A6A6NMZ7 2263 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 FPR2P25090 351 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 RPL7L1Q6DKI1 246 aaKnown RBP10.39□□□□□ -0.75
SMPD4-213ENST00000454468 LPCAT3Q6P1A2 487 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 ZNF695Q8IW36 515 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 LRRC46Q96FV0 321 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 SH3BGRL2Q9UJC5 107 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 TNFSF18Q9UNG2 199 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 KLRC4-KLRK1H3BQV0 150 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 PET100P0DJ07 73 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 BCL3P20749 454 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 QRFPP83859 136 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 SRSF6Q13247 344 aaKnown RBP10.39□□□□□ -0.75
SMPD4-213ENST00000454468 MPPED2Q15777 294 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 PNLIPRP3Q17RR3 467 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 PLEKHN1Q494U1 663 aaPredicted RBP10.39□□□□□ -0.75
SMPD4-213ENST00000454468 OR2A2Q6IF42 318 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 LYZL2Q7Z4W2 148 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 GGNQ86UU5 652 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 BAP18Q8IXM2 172 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 OR10AD1Q8NGE0 317 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 PSMF1Q92530 271 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 EXTL1Q92935 676 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 TMEM9BQ9NQ34 198 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 AKAP6Q13023 2319 aa10.39□□□□□ -0.75
SMPD4-213ENST00000454468 NUP210LQ5VU65 1888 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 IGKV1-27A0A075B6S5 117 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 A0A0U1RQV5 110 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 B4E171 279 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 H3BP45 60 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 SIRPB1O00241 398 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 NKX2-8O15522 239 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 S100A6P06703 90 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 TSPAN7P41732 249 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 ZNF133P52736 654 aaPredicted RBP10.38□□□□□ -0.75
SMPD4-213ENST00000454468 VAMP2P63027 116 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 VHLLQ6RSH7 139 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 NUFIP2Q7Z417 695 aaKnown RBP10.38□□□□□ -0.75
SMPD4-213ENST00000454468 OR6K3Q8NGY3 331 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 TRIB1Q96RU8 372 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 DMRTA2Q96SC8 542 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 KIF25Q9UIL4 384 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 TK1P04183 234 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 CST2P09228 141 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 AKR1C3P42330 323 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 FAM3AP98173 230 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 PDZK1IP1Q13113 114 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 PAN3Q58A45 887 aaKnown RBP10.38□□□□□ -0.75
SMPD4-213ENST00000454468 C10orf128Q5T292 105 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 TMEM268Q5VZI3 342 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 GGNBP1Q5YKI7 109 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 LHFPL2Q6ZUX7 228 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 KCNRGQ8N5I3 272 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 SPSB1Q96BD6 273 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 SF3B5Q9BWJ5 86 aaKnown RBP10.38□□□□□ -0.75
SMPD4-213ENST00000454468 CDH20Q9HBT6 801 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 NIT2Q9NQR4 276 aa10.38□□□□□ -0.75
SMPD4-213ENST00000454468 ZNF716A6NP11 495 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 PRF1P14222 555 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 CBR1P16152 277 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 TBPP20226 339 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 PTGER4P35408 488 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 ID4P47928 161 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 FUT6P51993 359 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 ALKBH6Q3KRA9 238 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 OR2B11Q5JQS5 317 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 BPIFCQ8NFQ6 507 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms