RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 BTNL3Q6UXE8 466 aa23.17■■□□□ 1.3
SMARCC1-203ENST00000454240 CDH26Q8IXH8 852 aa23.17■■□□□ 1.3
SMARCC1-203ENST00000454240 TNFAIP8L1Q8WVP5 186 aa23.17■■□□□ 1.3
SMARCC1-203ENST00000454240 NKX3-1Q99801 234 aaPredicted RBP23.17■■□□□ 1.3
SMARCC1-203ENST00000454240 PPIL3Q9H2H8 161 aaKnown RBP23.17■■□□□ 1.3
SMARCC1-203ENST00000454240 ENSAO43768 121 aaKnown RBP23.16■■□□□ 1.3
SMARCC1-203ENST00000454240 MAS1P04201 325 aa23.16■■□□□ 1.3
SMARCC1-203ENST00000454240 UCHL1P09936 223 aa23.16■■□□□ 1.3
SMARCC1-203ENST00000454240 PRKACAP17612 351 aa23.16■■□□□ 1.3
SMARCC1-203ENST00000454240 GABRA5P31644 462 aa23.16■■□□□ 1.3
SMARCC1-203ENST00000454240 OR3A4PP47883 348 aa23.16■■□□□ 1.3
SMARCC1-203ENST00000454240 FIP1L1Q6UN15 594 aaKnown RBP23.16■■□□□ 1.3
SMARCC1-203ENST00000454240 LYPD6Q86Y78 171 aa23.16■■□□□ 1.3
SMARCC1-203ENST00000454240 RPUSD1Q9UJJ7 312 aaKnown RBP23.16■■□□□ 1.3
SMARCC1-203ENST00000454240 LIPFP07098 398 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 CHRM2P08172 466 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 CALCBP10092 127 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 SPIN3Q5JUX0 258 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 ELP2Q6IA86 826 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 PNLDC1Q8NA58 520 aaKnown RBP23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 LY6G5BQ8NDX9 201 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 TMEM185AQ8NFB2 350 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 Q8NFD4 153 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 PHYHIPQ92561 330 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 DCTN5Q9BTE1 182 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 AUP1Q9Y679 476 aa23.15■■□□□ 1.3
SMARCC1-203ENST00000454240 MEGF11A6BM72 1044 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 RGS9O75916 674 aaPredicted RBP23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 SRMP19623 302 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 FABP5Q01469 135 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 COL10A1Q03692 680 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 HSD17B12Q53GQ0 312 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 C8orf46Q8TAG6 207 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 MRI1Q9BV20 369 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 FAM192AQ9GZU8 254 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 TCF7L1Q9HCS4 588 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 NDUFB11Q9NX14 153 aa23.14■■□□□ 1.29
SMARCC1-203ENST00000454240 TNFAIP8O95379 198 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 HAND1O96004 215 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 NDUFB7P17568 137 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 ADRA2CP18825 462 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 MTNR1BP49286 362 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 LRRTM1Q86UE6 522 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 TEX29Q8N6K0 151 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 NKAIN3Q8N8D7 197 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 DMRTB1Q96MA1 342 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 FAM234AQ9H0X4 552 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 IL36GQ9NZH8 169 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 GSTK1Q9Y2Q3 226 aa23.13■■□□□ 1.29
SMARCC1-203ENST00000454240 K7N7A8 449 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 ZNF737O75373 536 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 CDRT1O95170 752 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 TK1P04183 234 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 FAM157CP0CG43 387 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 PPIAL4GP0DN37 164 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 DUSP1P28562 367 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 BMXP51813 675 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 RIPPLY3P57055 190 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 FGF12P61328 243 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 JAGN1Q8N5M9 183 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 H1FXQ92522 213 aaKnown RBP23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 CNTD2Q9H8S5 307 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 GLS2Q9UI32 602 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 ING4Q9UNL4 249 aa23.12■■□□□ 1.29
SMARCC1-203ENST00000454240 CCRL2O00421 344 aa23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 SRD5A1P18405 259 aa23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 PSMB9P28065 219 aa23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 CAPZA1P52907 286 aa23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 SNU13P55769 128 aaKnown RBP23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 RSU1Q15404 277 aa23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 CD200R1LQ6Q8B3 271 aa23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 METTL9Q9H1A3 318 aa23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 ELL3Q9HB65 397 aaPredicted RBP23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 CUBNO60494 3623 aa23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 MXRA5Q9NR99 2828 aa23.11■■□□□ 1.29
SMARCC1-203ENST00000454240 DSCAML1Q8TD84 2053 aa23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 SH2D1BO14796 132 aa23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 FSHBP01225 129 aa23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 CD37P11049 281 aa23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 SRP14P37108 136 aaKnown RBP23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 SYT6Q5T7P8 510 aaPredicted RBP23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 OR51T1Q8NGJ9 327 aa23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 OR10K1Q8NGX5 313 aa23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 MUL1Q969V5 352 aa23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 SNX22Q96L94 193 aa23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 UQCC2Q9BRT2 126 aa23.1■■□□□ 1.29
SMARCC1-203ENST00000454240 TMEM82A0PJX8 343 aa23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 ARL6IP5O75915 188 aa23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 LMO1P25800 156 aa23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 C17orf107Q6ZR85 190 aa23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 ASCC1Q8N9N2 400 aaKnown RBP23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 NANPQ8TBE9 248 aa23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 UPRTQ96BW1 309 aa23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 S100A13Q99584 98 aa23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 ZNF696Q9H7X3 374 aa23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 EXOSC4Q9NPD3 245 aaKnown RBP23.09■■□□□ 1.29
SMARCC1-203ENST00000454240 NAV3Q8IVL0 2385 aa23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 TRBV23-1A0A0A0MS06 115 aa23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 HTR3BO95264 441 aa23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 OR2H2O95918 312 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms