RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 NUP210Q8TEM1 1887 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 LOC390937A0A1W2PQ73 354 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 GABRA4P48169 554 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 EFNA3P52797 238 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 UBE2V2Q15819 145 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 CDPF1Q6NVV7 123 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 LRP11Q86VZ4 500 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 OPA3Q9H6K4 179 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 WFDC1Q9HC57 220 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 LANCL2Q9NS86 450 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 ZNF729A6NN14 1252 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 SEC14L6B5MCN3 397 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 TSPAN2O60636 221 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 SERPINE2P07093 398 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 CDX1P47902 265 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 ZNF133P52736 654 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 RND3P61587 244 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 C10orf91Q5T1B1 145 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 FRZBQ92765 325 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 PLK3Q9H4B4 646 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 TREM2Q9NZC2 230 aa12.15□□□□□ -0.46
UBE2D3-210ENST00000453744 C5orf63A6NC05 138 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 IGHV3-9P01782 118 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 IGLV3-21P80748 117 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 PIGYQ3MUY2 71 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 BEND4Q6ZU67 534 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 SLC35G3Q8N808 338 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 RPUSD4Q96CM3 377 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 GABRG3Q99928 467 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 KCNS2Q9ULS6 477 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 PCNX3Q9H6A9 2034 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 LIPT2A6NK58 231 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 ADAM20O43506 726 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 DUX1O43812 170 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 TK1P04183 234 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 MSR1P21757 451 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 HTR5AP47898 357 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 PLXDC1Q8IUK5 500 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 OR10G3Q8NGC4 313 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF705FA8MVS1 300 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 HOXC4P09017 264 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF705DP0CH99 300 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF705BP0CI00 300 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 IAPPP10997 89 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 DRD1P21728 446 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 ECI1P42126 302 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 MLF1P58340 268 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF154Q13106 437 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 NKAIN1Q4KMZ8 207 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 CYB5R2Q6BCY4 276 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 RTL6Q6ICC9 239 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 EDARADDQ8WWZ3 215 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 THOC3Q96J01 351 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 PACRGQ96M98 296 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 OR51B6Q9H340 312 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 ZDHHC8Q9ULC8 765 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 LAMP3Q9UQV4 416 aa12.14□□□□□ -0.47
UBE2D3-210ENST00000453744 ANKUB1A6NFN9 424 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 TRAPPC6AO75865 159 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 FOLR2P14207 255 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 DYNLT3P51808 116 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 DPPA2Q7Z7J5 298 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 UBALD1Q8TB05 177 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 TMEM37Q8WXS4 190 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 DKKL1Q9UK85 242 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 CLDN16Q9Y5I7 305 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 NR2C1P13056 603 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 CD38P28907 300 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 RBP2P50120 134 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 CHD7Q9P2D1 2997 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 IGKV1-9A0A0C4DH69 117 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 OR5H1A6NKK0 313 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 SCGB1D1O95968 90 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 FOSL2P15408 326 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 CD200P41217 278 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 TMEM267Q0VDI3 215 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 SLC39A7Q92504 469 aa12.13□□□□□ -0.47
UBE2D3-210ENST00000453744 OBSL1O75147 1896 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 A0A1W2PPQ1 181 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 FTCDNL1E5RQL4 147 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 DHRS3O75911 302 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 PGA4P0DJD7 388 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 PGA5P0DJD9 388 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 CXorf66Q5JRM2 361 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 WDFY1Q8IWB7 410 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 OR5L2Q8NGL0 311 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 Q8WTZ3 238 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 RBMXL1Q96E39 390 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 PLA2G2EQ9NZK7 142 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 A0A1B0GX78 115 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 HBE1P02100 147 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 MMP7P09237 267 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 AADACP22760 399 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 CNN3Q15417 329 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 IL22RA1Q8N6P7 574 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 KIAA1549LQ6ZVL6 1849 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 CRYM-AS1A6NIL9 109 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 IGKV3-11P04433 115 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms