RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 AQP3Q92482 292 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 BOD1Q96IK1 185 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 MYEF2Q9P2K5 600 aaKnown RBP13.72□□□□□ -0.21
SNX17-204ENST00000453453 OR52A1Q9UKL2 312 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 CACNA1BQ00975 2339 aa13.71□□□□□ -0.21
SNX17-204ENST00000453453 DBX1A6NMT0 343 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 F5H5K5 113 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 COX5BP10606 129 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 PSMB6P28072 239 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 MFGE8Q08431 387 aaPredicted RBP13.71□□□□□ -0.22
SNX17-204ENST00000453453 SLC6A7Q99884 636 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 ESRP2Q9H6T0 727 aaKnown RBP13.71□□□□□ -0.22
SNX17-204ENST00000453453 OBP2BQ9NPH6 170 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 FAM206AQ9NX38 181 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 ELOVL5Q9NYP7 299 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 RAB22AQ9UL26 194 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 VSIG4Q9Y279 399 aa13.71□□□□□ -0.22
SNX17-204ENST00000453453 METTL21EPA6NDL7 271 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 A8MXE2 369 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 M0QYG6 137 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 M0R135 149 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 SRSF10O75494 262 aaKnown RBP13.7□□□□□ -0.22
SNX17-204ENST00000453453 PNPP00491 289 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 ZNF121P58317 390 aaPredicted RBP13.7□□□□□ -0.22
SNX17-204ENST00000453453 MRPL49Q13405 166 aaKnown RBP13.7□□□□□ -0.22
SNX17-204ENST00000453453 NKPD1Q17RQ9 610 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 EIF5AL1Q6IS14 154 aaKnown RBP13.7□□□□□ -0.22
SNX17-204ENST00000453453 ZNF474Q6S9Z5 364 aaPredicted RBP13.7□□□□□ -0.22
SNX17-204ENST00000453453 ZNF704Q6ZNC4 412 aaPredicted RBP13.7□□□□□ -0.22
SNX17-204ENST00000453453 OR51A4Q8NGJ6 313 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 SFT2D1Q8WV19 159 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 ZNF799Q96GE5 643 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 TCEAL7Q9BRU2 100 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 FBLN5Q9UBX5 448 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 AMDHD2Q9Y303 409 aa13.7□□□□□ -0.22
SNX17-204ENST00000453453 SPENQ96T58 3664 aaKnown RBP13.7□□□□□ -0.22
SNX17-204ENST00000453453 MEIS3P1A6NDR6 274 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 ISG15P05161 165 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 APLNRP35414 380 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 RAB5BP61020 215 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 HMGN3Q15651 99 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 ACTBL2Q562R1 376 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 MDP1Q86V88 176 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 PGAM5Q96HS1 289 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 EGLN1Q9GZT9 426 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 PBOV1Q9GZY1 135 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 CHMP1AQ9HD42 196 aaPredicted RBP13.69□□□□□ -0.22
SNX17-204ENST00000453453 G6PC2Q9NQR9 355 aa13.69□□□□□ -0.22
SNX17-204ENST00000453453 CRYGSP22914 178 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
SNX17-204ENST00000453453 PPP1R1AQ13522 171 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 ODF4Q2M2E3 257 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 TMEM244Q5VVB8 128 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 C15orf54Q8N8G6 183 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 ASB5Q8WWX0 329 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 FAM46BQ96A09 425 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 CST11Q9H112 138 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 UQCC1Q9NVA1 299 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 DNAJB11Q9UBS4 358 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 SLC22A13Q9Y226 551 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 COL6A6A6NMZ7 2263 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 POLEQ07864 2286 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 ZNF503-AS2A6NEH8 195 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 OR5H1A6NKK0 313 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 CEACAM18A8MTB9 384 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 TAAR5O14804 337 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 CHRNB4P30926 498 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 IL13RA1P78552 427 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 ZNF260Q3ZCT1 412 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 RNF212Q495C1 297 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 ASPHD2Q6ICH7 369 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 FAM57BQ71RH2 274 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 FJX1Q86VR8 437 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 LYPD6Q86Y78 171 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 PAQR4Q8N4S7 273 aaPredicted RBP13.68□□□□□ -0.22
SNX17-204ENST00000453453 LPAR3Q9UBY5 353 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 ANAPC10Q9UM13 185 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 HHLA2Q9UM44 414 aa13.68□□□□□ -0.22
SNX17-204ENST00000453453 DBHP09172 617 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 SLC2A1P11166 492 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 TLE1Q04724 770 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 PEA15Q15121 130 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 SWI5Q1ZZU3 235 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 KRTAP27-1Q3LI81 207 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 SCGB2B2Q4G0G5 96 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 TIMM23BQ5SRD1 257 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 GLYATL3Q5SZD4 288 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 COMMD2Q86X83 199 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 CBLN2Q8IUK8 224 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 CPEB3Q8NE35 698 aaKnown RBP13.67□□□□□ -0.22
SNX17-204ENST00000453453 MUCL1Q96DR8 90 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 SMIM8Q96KF7 97 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 AQP10Q96PS8 301 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 NRIP2Q9BQI9 281 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 OR10A2Q9H208 303 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 RAB18Q9NP72 206 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 SMCO4Q9NRQ5 59 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 CYTL1Q9NRR1 136 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 TAS2R4Q9NYW5 299 aa13.67□□□□□ -0.22
SNX17-204ENST00000453453 JKAMPQ9P055 326 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms