RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 IGHV4-31P0DP07 118 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CD37P11049 281 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CD36P16671 472 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CALRP27797 417 aaKnown RBP7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CFPP27918 469 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 FGF12P61328 243 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 GNB2P62879 340 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 TAGLNQ01995 201 aaKnown RBP7.26□□□□□ -1.25
COL28A1-205ENST00000453441 IL13RA2Q14627 380 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 ZNF146Q15072 292 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 RSU1Q15404 277 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 LRRC10Q5BKY1 277 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 DMRTC1Q5HYR2 192 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 NHLRC3Q5JS37 347 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 FAM201AQ5SY85 155 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 SFRP4Q6FHJ7 346 aaPredicted RBP7.26□□□□□ -1.25
COL28A1-205ENST00000453441 FAM166AQ6J272 317 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 ZNF788Q6ZQV5 615 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 LRRTM1Q86UE6 522 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 TPRA1Q86W33 373 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 FAM58AQ8N1B3 248 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CIARTQ8N365 385 aaPredicted RBP7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CHST4Q8NCG5 386 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 DEFB108BQ8NET1 73 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 Q8NFD4 153 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 OR6M1Q8NGM8 313 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 TBC1D15Q8TC07 691 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 EMG1Q92979 244 aaKnown RBP7.26□□□□□ -1.25
COL28A1-205ENST00000453441 SLAMF9Q96A28 289 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 KCTD7Q96MP8 289 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 SSBP3Q9BWW4 388 aaPredicted RBP7.26□□□□□ -1.25
COL28A1-205ENST00000453441 FAM192AQ9GZU8 254 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CST11Q9H112 138 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 WDR13Q9H1Z4 485 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 NARFLQ9H6Q4 476 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 HMG20AQ9NP66 347 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 TMEM160Q9NX00 188 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CLN8Q9UBY8 286 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 OR5V1Q9UGF6 321 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 ABCA2Q9BZC7 2435 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 TRBV23-1A0A0A0MS06 115 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 WNT9BO14905 357 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 SPRY1O43609 319 aaPredicted RBP7.25□□□□□ -1.25
COL28A1-205ENST00000453441 BPNT1O95861 308 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 PLATP00750 562 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 GYPAP02724 150 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 LIPFP07098 398 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 SMIM18P0DKX4 95 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 PSG2P11465 335 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 GTF2F2P13984 249 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 BCL3P20749 454 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 PRDX2P32119 198 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 CAV3P56539 151 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 FAM189A2Q15884 450 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 DGUOKQ16854 277 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 C1orf100Q5SVJ3 147 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 WDR25Q64LD2 544 aaPredicted RBP7.25□□□□□ -1.25
COL28A1-205ENST00000453441 CRIP3Q6Q6R5 217 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 LYPD6Q86Y78 171 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 OR51T1Q8NGJ9 327 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 OR5D18Q8NGL1 313 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 RFT1Q96AA3 541 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 TMEM186Q96B77 213 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 MSI2Q96DH6 328 aaKnown RBP7.25□□□□□ -1.25
COL28A1-205ENST00000453441 SPACA5Q96QH8 159 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 RSRP1Q9BUV0 290 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 CNTD2Q9H8S5 307 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 ELL3Q9HB65 397 aaPredicted RBP7.25□□□□□ -1.25
COL28A1-205ENST00000453441 EXOSC4Q9NPD3 245 aaKnown RBP7.25□□□□□ -1.25
COL28A1-205ENST00000453441 TXNL4BQ9NX01 149 aaKnown RBP7.25□□□□□ -1.25
COL28A1-205ENST00000453441 ZNF222Q9UK12 451 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 KCNS2Q9ULS6 477 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 MRPS28Q9Y2Q9 187 aaKnown RBP7.25□□□□□ -1.25
COL28A1-205ENST00000453441 ZNF469Q96JG9 3925 aaPredicted RBP7.25□□□□□ -1.25
COL28A1-205ENST00000453441 WNK2Q9Y3S1 2297 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 MTORP42345 2549 aa7.25□□□□□ -1.25
COL28A1-205ENST00000453441 IGKV1D-17A0A075B6S4 117 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 IGHV3OR15-7A0A075B7D8 119 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 IGKV1-12A0A0C4DH73 117 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 A0A0G2JMP0 313 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 A0A0X1KG70 313 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 A0A1W2PPH5 198 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FUOMA2VDF0 154 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A10PA6NDY2 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A18PA6NE21 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A16PA6NEW6 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A20PA6NIJ5 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A8PA6NJQ4 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A7PA6NKC0 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 RFPL4AA6NLU0 287 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A22PA8MWA6 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A12PA8MX19 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A5PA8MXJ8 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM90A23PA8MXZ1 464 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 FAM157AC9JC47 383 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 RFPL4AL1F8VTS6 287 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 SLC17A2O00624 439 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 SH2D1BO14796 132 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 SLC22A1O15245 554 aa7.24□□□□□ -1.25
COL28A1-205ENST00000453441 ENSAO43768 121 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms