RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 VRK1Q99986 396 aaPredicted RBP10.11□□□□□ -0.79
VTA1-203ENST00000452973 PCDHB16Q9NRJ7 776 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 ACACAQ13085 2346 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 GTF3C1Q12789 2109 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 RPS10-NUDT3A0A1W2PQS6 291 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 PRKACAP17612 351 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 FCGR2CP31995 323 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 TGFBR3Q03167 851 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 FOXF2Q12947 444 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 PHLDA2Q53GA4 152 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 TFAP2EQ6VUC0 442 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 PEG10Q86TG7 708 aaKnown RBP10.11□□□□□ -0.79
VTA1-203ENST00000452973 MRPS24Q96EL2 167 aaKnown RBP10.11□□□□□ -0.79
VTA1-203ENST00000452973 OR2J1Q9GZK6 312 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 NECAP2Q9NVZ3 263 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 ZNF175Q9Y473 711 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 ATMQ13315 3056 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 INTS1Q8N201 2190 aaKnown RBP10.11□□□□□ -0.79
VTA1-203ENST00000452973 APC2O95996 2303 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 HS3ST1O14792 307 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 KLK10O43240 276 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 RPA2P15927 270 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 PTGER4P35408 488 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 PPA1Q15181 289 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 TBC1D28Q2M2D7 210 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 COMMD7Q86VX2 200 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 MKXQ8IYA7 352 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 C9orf106Q8NAJ2 232 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 EXTL1Q92935 676 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 TAAR6Q96RI8 345 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 CEP295Q9C0D2 2601 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 CDH20Q9HBT6 801 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 C12orf4Q9NQ89 552 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 DLL3Q9NYJ7 618 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 CLCF1Q9UBD9 225 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 PTPRBP23467 1997 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 TM4SF5O14894 197 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 IGSF11Q5DX21 431 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 RELL2Q8NC24 303 aaPredicted RBP10.1□□□□□ -0.79
VTA1-203ENST00000452973 OR5L1Q8NGL2 311 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 DCUN1D4Q92564 292 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 OR10C1Q96KK4 312 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 ZNF471Q9BX82 626 aaPredicted RBP10.1□□□□□ -0.79
VTA1-203ENST00000452973 EDARQ9UNE0 448 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 ANKRD11Q6UB99 2663 aaPredicted RBP10.1□□□□□ -0.79
VTA1-203ENST00000452973 ZNF891A8MT65 544 aaPredicted RBP10.1□□□□□ -0.79
VTA1-203ENST00000452973 BET1O15155 118 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 RHBDL1O75783 438 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 RLN2P04090 185 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 SELEP16581 610 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 PSMB6P28072 239 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 CALCRP30988 508 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 ABCA11PQ4W5N1 156 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 FAM74A1Q5RGS3 127 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 Q6ZPA2 131 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 INO80EQ8NBZ0 244 aaPredicted RBP10.1□□□□□ -0.79
VTA1-203ENST00000452973 RDH5Q92781 318 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 ZNF286AQ9HBT8 521 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 IL36GQ9NZH8 169 aa10.1□□□□□ -0.79
VTA1-203ENST00000452973 DBX1A6NMT0 343 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 I3L521 148 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 SS18L1O75177 396 aaPredicted RBP10.09□□□□□ -0.79
VTA1-203ENST00000452973 CA11O75493 328 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 CST4P01036 141 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 IGHG3P01860 377 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 CEACAM1P13688 526 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 RBMXP38159 391 aaKnown RBP10.09□□□□□ -0.79
VTA1-203ENST00000452973 PIGPP57054 158 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 S100A10P60903 97 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 DAZAP2Q15038 168 aaPredicted RBP10.09□□□□□ -0.79
VTA1-203ENST00000452973 ALKBH6Q3KRA9 238 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 ESCO2Q56NI9 601 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 CLLU1Q5K131 121 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 UNQ6126/PRO20091Q6UXV3 157 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 SGPP2Q8IWX5 399 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 ZADH2Q8N4Q0 377 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 ZNF75AQ96N20 296 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 TNFSF18Q9UNG2 199 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 NBEAQ8NFP9 2946 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 KANTRA0A1W2PQU2 76 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 CEACAM18A8MTB9 384 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 IFNA2P01563 188 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 CRHP06850 196 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 ZNF728P0DKX0 622 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 DTYMKP23919 212 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 LUMP51884 338 aaPredicted RBP10.09□□□□□ -0.79
VTA1-203ENST00000452973 NHLRC3Q5JS37 347 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 ZNF660Q6AZW8 331 aaPredicted RBP10.09□□□□□ -0.79
VTA1-203ENST00000452973 OR5A2Q8NGI9 324 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 OR5P3Q8WZ94 311 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 SARAFQ96BY9 339 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 CXorf58Q96LI9 332 aa10.09□□□□□ -0.79
VTA1-203ENST00000452973 HLA-GP17693 338 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 HOXC12P31275 282 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 KIR2DL2P43627 348 aaPredicted RBP10.08□□□□□ -0.8
VTA1-203ENST00000452973 PPP1CBP62140 327 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 OR11L1Q8NGX0 322 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 ASB13Q8WXK3 278 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 FZR1Q9UM11 496 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 LINC00862A6NCI5 91 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms