RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 PSPNO60542 156 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 ALDOBP05062 364 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 RNASE1P07998 156 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 IGFBP3P17936 291 aaPredicted RBP13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 MYL12AP19105 171 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 LMO1P25800 156 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 PRB3Q04118 309 aaPredicted RBP13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 IRF3Q14653 427 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 KISS1Q15726 138 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 TCF23Q7RTU1 214 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 SGCDQ92629 289 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 RFT1Q96AA3 541 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 SNX22Q96L94 193 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 VCXQ9H320 206 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 METTL8Q9H825 291 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 RHOFQ9HBH0 211 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 SIRT7Q9NRC8 400 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 OR14J1Q9UGF5 321 aa13.18□□□□□ -0.3
SCAMP4-205ENST00000452128 INMTO95050 263 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 CDK1P06493 297 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 MYF6P23409 242 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 SOX2P48431 317 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 POU3F4P49335 361 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 RPL31P62899 125 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 BAMBIQ13145 260 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 RIPK1Q13546 671 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 ELP2Q6IA86 826 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 Q6P435 159 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 LYPD6Q86Y78 171 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 CMTM4Q8IZR5 234 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 PXT1Q8NFP0 134 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 OR4M1Q8NGD0 313 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 OR13C5Q8NGS8 318 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 DUX5Q96PT3 197 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 CDCA4Q9BXL8 241 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 ANKRD60Q9BZ19 345 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 DUSP21Q9H596 190 aa13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 LSM2Q9Y333 95 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-205ENST00000452128 A0A0U1RQK1 487 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 C17orf98A8MV24 154 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 HAND1O96004 215 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 MELTFP08582 738 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 CALCBP10092 127 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 DUSP1P28562 367 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 UBE2E1P51965 193 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 ERVFRD-1P60508 538 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 SLC35A2P78381 396 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 ACSM1Q08AH1 577 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 KLRD1Q13241 179 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 ZNF273Q14593 569 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 SPIN3Q5JUX0 258 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 RBMS3Q6XE24 437 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 AHSA2Q719I0 299 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 LDLRAD3Q86YD5 345 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 OR8H2Q8N162 312 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 ZFP41Q8N8Y5 198 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 OR5D18Q8NGL1 313 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 EMG1Q92979 244 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 TMEM106AQ96A25 262 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 ORAI1Q96D31 301 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 ZMAT3Q9HA38 289 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 TAS2R4Q9NYW5 299 aa13.16□□□□□ -0.3
SCAMP4-205ENST00000452128 PIN1P1O15428 100 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 HOXA3O43365 443 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 HKR1P10072 659 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 RAB3AP20336 220 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 OR3A1P47881 315 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 WNT4P56705 351 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 YIF1BQ5BJH7 314 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 PDZD9Q8IXQ8 264 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 PNKDQ8N490 385 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 TMEM86BQ8N661 226 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 OR4S1Q8NGB4 309 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 OR5D13Q8NGL4 314 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 TBC1D15Q8TC07 691 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 TSEN15Q8WW01 171 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 CHCHD3Q9NX63 227 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 PCDHGB5Q9Y5G0 923 aa13.15□□□□□ -0.3
SCAMP4-205ENST00000452128 TRAV8-7A0A075B6U6 113 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 A0A1W2PQ09 198 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 GABRPO00591 440 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 NPFFO15130 113 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 OCM2P0CE71 109 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 CCL3L1P16619 93 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 PRKACAP17612 351 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 ERP29P30040 261 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 IER3P46695 156 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 CAPZA1P52907 286 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 GP2P55259 537 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 BDH1Q02338 343 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 MEF2CQ06413 473 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 MED21Q13503 144 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 Q499Y3 187 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 NCR3LG1Q68D85 454 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 C16orf87Q6PH81 154 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 UNQ9370/PRO34162Q6UXP9 181 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 FAM185AQ8N0U4 392 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 STX19Q8N4C7 294 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 OR51T1Q8NGJ9 327 aa13.14□□□□□ -0.31
SCAMP4-205ENST00000452128 TMEM138Q9NPI0 162 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms