RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 OR5R1Q8NH85 324 aa7.06□□□□□ -1.28
RFX3-209ENST00000451859 TRUB1Q8WWH5 349 aaKnown RBP7.06□□□□□ -1.28
RFX3-209ENST00000451859 LGALS12Q96DT0 336 aa7.06□□□□□ -1.28
RFX3-209ENST00000451859 C4orf36Q96KX1 117 aa7.06□□□□□ -1.28
RFX3-209ENST00000451859 HEXA-AS1Q9H8Q6 139 aa7.06□□□□□ -1.28
RFX3-209ENST00000451859 NEK6Q9HC98 313 aa7.06□□□□□ -1.28
RFX3-209ENST00000451859 AMBNQ9NP70 447 aa7.06□□□□□ -1.28
RFX3-209ENST00000451859 RBFOX1Q9NWB1 397 aaKnown RBP7.06□□□□□ -1.28
RFX3-209ENST00000451859 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
RFX3-209ENST00000451859 PLXNB1O43157 2135 aa7.06□□□□□ -1.28
RFX3-209ENST00000451859 IGKV1-9A0A0C4DH69 117 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 hCG_1809904A0A1W2PP81 198 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 A0A1W2PPE2 198 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 A0A1W2PR64 198 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 A0A1W2PRV1 198 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 TMEM82A0PJX8 343 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 SNTNA6NMZ2 147 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 K7N7A8 449 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 SIRPB1O00241 398 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ZNF737O75373 536 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 BAG2O95816 211 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 HAND1O96004 215 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 CYB5AP00167 134 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ARG1P05089 322 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 CHRM2P08172 466 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 DBTP11182 482 aaKnown RBP7.05□□□□□ -1.28
RFX3-209ENST00000451859 PRKACAP17612 351 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ATF1P18846 271 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 GABRR1P24046 479 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ATP1B3P54709 279 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ISL1P61371 349 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 SNRPGP62308 76 aaKnown RBP7.05□□□□□ -1.28
RFX3-209ENST00000451859 DYNC1I2Q13409 638 aaKnown RBP7.05□□□□□ -1.28
RFX3-209ENST00000451859 OCLNQ16625 522 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 LRRC75BQ2VPJ9 315 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 MIDNQ504T8 468 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 TMEM244Q5VVB8 128 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 MEDAGQ5VYS4 303 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 RNF144BQ7Z419 303 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 LHFPL4Q7Z7J7 247 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ENTHD1Q8IYW4 607 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ZSCAN4Q8NAM6 433 aaPredicted RBP7.05□□□□□ -1.28
RFX3-209ENST00000451859 CCDC54Q8NEL0 328 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 OR13C9Q8NGT0 318 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 PP6455Q8WZ26 134 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 PELI1Q96FA3 418 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 OPALINQ96PE5 141 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 NKX3-1Q99801 234 aaPredicted RBP7.05□□□□□ -1.28
RFX3-209ENST00000451859 SLC29A1Q99808 456 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 C9orf16Q9BUW7 83 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ALG8Q9BVK2 526 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ISG20L2Q9H9L3 353 aaKnown RBP7.05□□□□□ -1.28
RFX3-209ENST00000451859 TCF7L1Q9HCS4 588 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 S100A14Q9HCY8 104 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 ING3Q9NXR8 418 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 HHLA2Q9UM44 414 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 MYRFQ9Y2G1 1151 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 SIGLEC9Q9Y336 463 aa7.05□□□□□ -1.28
RFX3-209ENST00000451859 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 J3QRE1 110 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 M0QZ24 198 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 TIMM23O14925 209 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 KCNAB3O43448 404 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 TSPAN15O95858 294 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 HCKP08631 526 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 ZNF728P0DKX0 622 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 GABRA5P31644 462 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 TGFBR2P37173 567 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 DLX6P56179 175 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 PROK1P58294 105 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 ACTA2P62736 377 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 ACTG2P63267 376 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 SCN1BQ07699 218 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 ALKBH1Q13686 389 aaKnown RBP7.04□□□□□ -1.28
RFX3-209ENST00000451859 GRK1Q15835 563 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 FAM189A2Q15884 450 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 LPCAT4Q643R3 524 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 SLC35E4Q6ICL7 350 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 ZBTB49Q6ZSB9 765 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 LHFPL2Q6ZUX7 228 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 TRAPPC6BQ86SZ2 158 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 OR8H2Q8N162 312 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 FAM58AQ8N1B3 248 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 DYNAPQ8N1N2 210 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 PQLC1Q8N2U9 271 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 C11orf42Q8N5U0 333 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 C11orf44Q8N8P7 122 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 OR52N4Q8NGI2 321 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 TSEN15Q8WW01 171 aaKnown RBP7.04□□□□□ -1.28
RFX3-209ENST00000451859 MRPL48Q96GC5 212 aaKnown RBP7.04□□□□□ -1.28
RFX3-209ENST00000451859 AJUBAQ96IF1 538 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 ZNF714Q96N38 554 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 CITED1Q99966 193 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 FAM234AQ9H0X4 552 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 EXOGQ9Y2C4 368 aaKnown RBP7.04□□□□□ -1.28
RFX3-209ENST00000451859 GSTK1Q9Y2Q3 226 aa7.04□□□□□ -1.28
RFX3-209ENST00000451859 TRBV2A0A0J9YWF9 115 aa7.03□□□□□ -1.28
RFX3-209ENST00000451859 LOC100130705A0A1B0GUX0 176 aa7.03□□□□□ -1.28
RFX3-209ENST00000451859 FAM172BPA6NC97 362 aa7.03□□□□□ -1.28
RFX3-209ENST00000451859 OR4C45A6NMZ5 311 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms