RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 PPP1R1CQ8WVI7 109 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 MYOZ1Q9NP98 299 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-202ENST00000451716 IGKV1-27A0A075B6S5 117 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 A0A1W2PPE3 182 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 DNPH1O43598 174 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 NPSP0C0P6 89 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 PAX6P26367 422 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 MAGEA5P43359 124 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 SNU13P55769 128 aaKnown RBP10.49□□□□□ -0.73
COL27A1-202ENST00000451716 PYY3Q5JQD4 70 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 TSPO2Q5TGU0 170 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 ABLIM2Q6H8Q1 611 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 GSG1LQ6UXU4 331 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 HOGA1Q86XE5 327 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 FAM89BQ8N5H3 189 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 ZDHHC22Q8N966 263 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 BPIFCQ8NFQ6 507 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 OR2M7Q8NG81 312 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 OR1S1Q8NH92 325 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 CPT1CQ8TCG5 803 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 DMRTA2Q96SC8 542 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 NUDT16L1Q9BRJ7 211 aaKnown RBP10.49□□□□□ -0.73
COL27A1-202ENST00000451716 DDA1Q9BW61 102 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 GPR35Q9HC97 309 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF701Q9NV72 531 aaPredicted RBP10.49□□□□□ -0.73
COL27A1-202ENST00000451716 IGKV1D-8A0A087WSZ0 117 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 A0A096LPE4 126 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 C13orf42A0A1B0GVH6 325 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 A0A1W2PPZ6 126 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 CST2P09228 141 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 UBBP0CG47 229 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 PPT1P50897 306 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 PDZK1IP1Q13113 114 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 C3AR1Q16581 482 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 NCMAPQ5T1S8 102 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 BRICD5Q6PL45 260 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 DRAM2Q6UX65 266 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 SULF2Q8IWU5 870 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 PDZD9Q8IXQ8 264 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 CSNK2A3Q8NEV1 391 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 OR5H2Q8NGV7 314 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 MITD1Q8WV92 249 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 PECRQ9BY49 303 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 C5orf66Q9H5L9 145 aa10.49□□□□□ -0.73
COL27A1-202ENST00000451716 J3QW42 95 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF205O95201 554 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 IFNA10P01566 189 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 BMI1P35226 326 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 FOXG1P55316 489 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 SLC9A3R2Q15599 337 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 TAF9Q16594 264 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 DCAF10Q5QP82 559 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 ATP1A1-AS1Q5TC04 95 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 DHRS7BQ6IAN0 325 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 PHB2Q99623 299 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 OCSTAMPQ9BR26 566 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 OR2H1Q9GZK4 316 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 PRO1933Q9H354 126 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 MCTS1Q9ULC4 181 aaKnown RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 BOKQ9UMX3 212 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 RNF24Q9Y225 148 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 CNOT1A5YKK6 2376 aaKnown RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 H7C1Q1 480 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 MT-CO3P00414 261 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 IFNA2P01563 188 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 IL2RAP01589 272 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 CCL2P13500 99 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 CCNOP22674 350 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 MPZP25189 248 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 TAGLN2P37802 199 aaKnown RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 OR3A2P47893 321 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF92Q03936 586 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 PDCD1Q15116 288 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 OR1C1Q15619 314 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 TMEM164Q5U3C3 297 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 CLEC9AQ6UXN8 241 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 OR13G1Q8NGZ3 307 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 TOLLIPQ9H0E2 274 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 WDR13Q9H1Z4 485 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF703Q9H7S9 590 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 CALHM2Q9HA72 323 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 EHFQ9NZC4 300 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 STARD10Q9Y365 291 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 DCHS1Q96JQ0 3298 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 C5orf51A6NDU8 294 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 OR6C6A6NF89 314 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 FOXI3A8MTJ6 420 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF587BE7ETH6 402 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 CYTIPO60759 359 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 NQO2P16083 231 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF660Q6AZW8 331 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 RELL2Q8NC24 303 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-202ENST00000451716 C22orf15Q8WYQ4 148 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 DYRK2Q92630 601 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 TMEM230Q96A57 120 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 SLC7A10Q9NS82 523 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 PLEKHJ1Q9NW61 149 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 KCNIP3Q9Y2W7 256 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 TIMM10BQ9Y5J6 103 aa10.48□□□□□ -0.73
COL27A1-202ENST00000451716 NUDT19A8MXV4 375 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms