RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 J3KRW8 73 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 UBE2CO00762 179 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 SMPD2O60906 423 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 FBP1P09467 338 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 ANXA7P20073 488 aaKnown RBP8.44□□□□□ -1.06
CCDC171-203ENST00000449575 ARHGDIBP52566 201 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 KRTAP27-1Q3LI81 207 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 CDNFQ49AH0 187 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 ACSM3Q53FZ2 586 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 SLC16A13Q7RTY0 426 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 OR2AK2Q8NG84 335 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 TMEM171Q8WVE6 324 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 RNF133Q8WVZ7 376 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 C4orf45Q96LM5 186 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 MRI1Q9BV20 369 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 ISG20L2Q9H9L3 353 aaKnown RBP8.44□□□□□ -1.06
CCDC171-203ENST00000449575 PLEKHA6Q9Y2H5 1048 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 C1orf196B1AJZ1 125 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 HS3ST1O14792 307 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 PTGFRP43088 359 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 UCP2P55851 309 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF85Q03923 595 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF345Q14585 488 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 SNAI3Q3KNW1 292 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 OR10H4Q8NGA5 316 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 C2CD4CQ8TF44 421 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 MNTQ99583 582 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 SEBOXQ9HB31 216 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-203ENST00000449575 TCF7L1Q9HCS4 588 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 MRPL15Q9P015 296 aaKnown RBP8.44□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF319Q9P2F9 582 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 MIOXQ9UGB7 285 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 STARD10Q9Y365 291 aa8.44□□□□□ -1.06
CCDC171-203ENST00000449575 SIRT4Q9Y6E7 314 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-203ENST00000449575 VSTM5A8MXK1 200 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF878C9JN71 531 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 OR2F2O95006 317 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 ABHD16AO95870 558 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 CD8AP01732 235 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 IGHV2-70P01814 119 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 DANCRP0C864 163 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 COX5BP10606 129 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 ATF1P18846 271 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 OTX1P32242 354 aaPredicted RBP8.43□□□□□ -1.06
CCDC171-203ENST00000449575 PDZK1IP1Q13113 114 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 OR2F1Q13607 317 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 RBMS2Q15434 407 aaKnown RBP8.43□□□□□ -1.06
CCDC171-203ENST00000449575 ADIPOQQ15848 244 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 FAM74A1Q5RGS3 127 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 CBLN2Q8IUK8 224 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 OR1J1Q8NGS3 322 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 OR52I2Q8NH67 350 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 PPP1R14AQ96A00 147 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 OR2J1Q9GZK6 312 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 LAMP3Q9UQV4 416 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 LRP12Q9Y561 859 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 PRRC2AP48634 2157 aaKnown RBP8.43□□□□□ -1.06
CCDC171-203ENST00000449575 M0R135 149 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 GOSR2O14653 212 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 SIGLEC5O15389 551 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 PAX6P26367 422 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 MPV17P39210 176 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 FABP6P51161 128 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 SNRPEP62304 92 aaKnown RBP8.43□□□□□ -1.06
CCDC171-203ENST00000449575 SLC3A1Q07837 685 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 MST1LQ2TV78 715 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 ALKBH6Q3KRA9 238 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 C11orf88Q6PI97 169 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF546Q86UE3 836 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 CMTM4Q8IZR5 234 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 ZCCHC24Q8N2G6 241 aaKnown RBP8.43□□□□□ -1.06
CCDC171-203ENST00000449575 KCNRGQ8N5I3 272 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 NUP37Q8NFH4 326 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 RXFP4Q8TDU9 374 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF799Q96GE5 643 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 SYT3Q9BQG1 590 aa8.43□□□□□ -1.06
CCDC171-203ENST00000449575 PAPOLGQ9BWT3 736 aaKnown RBP8.43□□□□□ -1.06
CCDC171-203ENST00000449575 MRPL37Q9BZE1 423 aaKnown RBP8.43□□□□□ -1.06
CCDC171-203ENST00000449575 MRM2Q9UI43 246 aaKnown RBP8.43□□□□□ -1.06
CCDC171-203ENST00000449575 OTOGQ6ZRI0 2925 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 C5orf52A6NGY3 159 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF729A6NN14 1252 aaPredicted RBP8.42□□□□□ -1.06
CCDC171-203ENST00000449575 PHYHO14832 338 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 BCL2L11O43521 198 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 PNPP00491 289 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 OR4A8P0C604 315 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 SLC6A9P48067 706 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 H2BFSP57053 126 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 PEA15Q15121 130 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 FAM76BQ5HYJ3 339 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 FAM27D1Q5T7N8 215 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 SLC36A1Q7Z2H8 476 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 OR2AE1Q8NHA4 323 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 SLC25A40Q8TBP6 338 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 TNFAIP8L1Q8WVP5 186 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 RAB40AQ8WXH6 277 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 PHYHIPQ92561 330 aa8.42□□□□□ -1.06
CCDC171-203ENST00000449575 S100A16Q96FQ6 103 aaKnown RBP8.42□□□□□ -1.06
CCDC171-203ENST00000449575 LURAP1Q96LR2 239 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms