RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SLCO1B1Q9Y6L6 691 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 WNK2Q9Y3S1 2297 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 IGLV1-36A0A0B4J1U3 117 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 FRG2CA6NGY1 282 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 SERPINE3A8MV23 424 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 NRASP01111 189 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 POU2F2P09086 479 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 CD38P28907 300 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 GABRA4P48169 554 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 RNF4P78317 190 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 HLA-DRB3P79483 266 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 PLAURQ03405 335 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 OR1K1Q8NGR3 316 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 OR13D1Q8NGV5 346 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 NAA60Q9H7X0 242 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 BCO1Q9HAY6 547 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 CACFD1Q9UGQ2 172 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 V9GYS6 101 aa10.91□□□□□ -0.66
UBE3B-204ENST00000449510 TCF20Q9UGU0 1960 aaKnown RBP10.9□□□□□ -0.66
UBE3B-204ENST00000449510 A0A1W2PPV4 95 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 OR6C6A6NF89 314 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 FTCDNL1E5RQL4 147 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 TGOLN2O43493 480 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 DDTP30046 118 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 EWSR1Q01844 656 aaKnown RBP eCLIP10.9□□□□□ -0.66
UBE3B-204ENST00000449510 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.9□□□□□ -0.66
UBE3B-204ENST00000449510 ZNF658BQ4V348 819 aaPredicted RBP10.9□□□□□ -0.66
UBE3B-204ENST00000449510 SPNS3Q6ZMD2 512 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 WDR5BQ86VZ2 330 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 SLC35G3Q8N808 338 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 HLA-CQ95604 372 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 SCARF2Q96GP6 870 aaPredicted RBP10.9□□□□□ -0.66
UBE3B-204ENST00000449510 RSG1Q9BU20 258 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 TLCD2A6NGC4 264 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 MSR1P21757 451 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 SNCAP37840 140 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 TMEM50BP56557 158 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 RND3P61587 244 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 ECH1Q13011 328 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 CLN3Q13286 438 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 SLC25A22Q9H936 323 aa10.9□□□□□ -0.66
UBE3B-204ENST00000449510 BLACEA4D250 179 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 ALG1L2C9J202 215 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 TNFRSF10CO14798 259 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 ZNF217O75362 1048 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 TRGC1P0CF51 173 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 MMP16P51512 607 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 SSTP61278 116 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 CCL20P78556 96 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 FUT7Q11130 342 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 ZNF665Q9H7R5 613 aa10.9□□□□□ -0.67
UBE3B-204ENST00000449510 FER1L5A0AVI2 2057 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 TRAPPC2LH3BP13 241 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 ZFAND5O76080 213 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 CD1AP06126 327 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 FGF7P21781 194 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 OTX2P32243 289 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 APOBEC1P41238 236 aaKnown RBP10.89□□□□□ -0.67
UBE3B-204ENST00000449510 CEBPEQ15744 281 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 ISXQ2M1V0 245 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 NINJ1Q92982 152 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 ELSPBP1Q96BH3 223 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 AQP10Q96PS8 301 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 DUSP15Q9H1R2 295 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-204ENST00000449510 TRAPPC2LQ9UL33 140 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 FUT9Q9Y231 359 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 TNS1Q9HBL0 1735 aaKnown RBP10.89□□□□□ -0.67
UBE3B-204ENST00000449510 UBE2L5PA0A1B0GUS4 154 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 HSPB2A8KAH6 182 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 GATCO43716 136 aaKnown RBP10.89□□□□□ -0.67
UBE3B-204ENST00000449510 NDUFB7P17568 137 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 CAPZBP47756 277 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 HSPB2Q16082 182 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 TRIM61Q5EBN2 209 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 ZNF684Q5T5D7 378 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 TOMM20LQ6UXN7 152 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 AAED1Q7RTV5 226 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 RNF133Q8WVZ7 376 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 IER2Q9BTL4 223 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 LRRC61Q9BV99 259 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 GPR87Q9BY21 358 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 MFRPQ9BY79 579 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 G6PC2Q9NQR9 355 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 METTL1Q9UBP6 276 aaKnown RBP10.89□□□□□ -0.67
UBE3B-204ENST00000449510 RARRES3Q9UL19 164 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 CXorf51AA0A1B0GTR3 108 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 C5orf52A6NGY3 159 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 K7EQS6 105 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 MASP2O00187 686 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 WISP1O95388 367 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 SMIM10L1P0DMW3 83 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 LBX1P52954 281 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 HLA-BQ31612 363 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 ZNF774Q6NX45 483 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 C9orf40Q8IXQ3 194 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 PAQR4Q8N4S7 273 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-204ENST00000449510 SMIM10Q96HG1 83 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 SMOC1Q9H4F8 434 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 PLEKHF2Q9H8W4 249 aa10.89□□□□□ -0.67
UBE3B-204ENST00000449510 UCK1Q9HA47 277 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms