RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CNTD2Q9H8S5 307 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 TPRKBQ9Y3C4 175 aa12.01□□□□□ -0.49
USP39-206ENST00000448971 TRBV23-1A0A0A0MS06 115 aa12□□□□□ -0.49
USP39-206ENST00000448971 F8VVB4 439 aa12□□□□□ -0.49
USP39-206ENST00000448971 F8VWA3 439 aa12□□□□□ -0.49
USP39-206ENST00000448971 MMP9P14780 707 aa12□□□□□ -0.49
USP39-206ENST00000448971 COL10A1Q03692 680 aa12□□□□□ -0.49
USP39-206ENST00000448971 PDZK1IP1Q13113 114 aa12□□□□□ -0.49
USP39-206ENST00000448971 YIF1BQ5BJH7 314 aa12□□□□□ -0.49
USP39-206ENST00000448971 BRD3OSQ6XYD6 125 aa12□□□□□ -0.49
USP39-206ENST00000448971 VMO1Q7Z5L0 202 aa12□□□□□ -0.49
USP39-206ENST00000448971 KIR3DL3Q8N743 410 aa12□□□□□ -0.49
USP39-206ENST00000448971 NANOGP1Q8N7R0 232 aa12□□□□□ -0.49
USP39-206ENST00000448971 ZNF485Q8NCK3 441 aa12□□□□□ -0.49
USP39-206ENST00000448971 OR51A2Q8NGJ7 313 aa12□□□□□ -0.49
USP39-206ENST00000448971 PGLYRP3Q96LB9 341 aa12□□□□□ -0.49
USP39-206ENST00000448971 TBX15Q96SF7 602 aa12□□□□□ -0.49
USP39-206ENST00000448971 ZNF747Q9BV97 191 aa12□□□□□ -0.49
USP39-206ENST00000448971 ZNF696Q9H7X3 374 aa12□□□□□ -0.49
USP39-206ENST00000448971 SIRT7Q9NRC8 400 aa12□□□□□ -0.49
USP39-206ENST00000448971 PAK1IP1Q9NWT1 392 aaPredicted RBP12□□□□□ -0.49
USP39-206ENST00000448971 IL36RNQ9UBH0 155 aa12□□□□□ -0.49
USP39-206ENST00000448971 CKLFQ9UBR5 152 aa12□□□□□ -0.49
USP39-206ENST00000448971 PCDHGB5Q9Y5G0 923 aa12□□□□□ -0.49
USP39-206ENST00000448971 KPTNQ9Y664 436 aa12□□□□□ -0.49
USP39-206ENST00000448971 ALX3O95076 343 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 HAND1O96004 215 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 TMEM225BP0DP42 221 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 CALCBP10092 127 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 CELP19835 753 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 NPBWR2P48146 333 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 PDCD1Q15116 288 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 MED22Q15528 200 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 KISS1Q15726 138 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 Q499Y3 187 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 RUSC1-AS1Q66K80 236 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 SATL1Q86VE3 508 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 FAM58AQ8N1B3 248 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 SIGLECL1Q8N7X8 197 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 LY6G5BQ8NDX9 201 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 C8orf46Q8TAG6 207 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 SGCDQ92629 289 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 LHX4Q969G2 390 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 OR14A2Q96R54 314 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 CCDC90BQ9GZT6 254 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 C19orf12Q9NSK7 152 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 GLS2Q9UI32 602 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 RAB26Q9ULW5 256 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 RRP15Q9Y3B9 282 aaKnown RBP11.99□□□□□ -0.49
USP39-206ENST00000448971 VWFP04275 2813 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 CMYA5Q8N3K9 4069 aa11.99□□□□□ -0.49
USP39-206ENST00000448971 IGKV1-12A0A0C4DH73 117 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 TRBV5-5A0A0J9YX44 114 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 A0A1W2PPH5 198 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 GABRPO00591 440 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 RGS10O43665 173 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 KDM4BO94953 1096 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 IGKV1D-12P01611 117 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 TK1P04183 234 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 CHRM2P08172 466 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 EDDM3BP56851 147 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 SLC35A2P78381 396 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 BDH1Q02338 343 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 BLMHQ13867 455 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 SPIN3Q5JUX0 258 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 DDI2Q5TDH0 399 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 ASPHD2Q6ICH7 369 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 RNF144BQ7Z419 303 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 PDZD9Q8IXQ8 264 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 BCL6BQ8N143 479 aaPredicted RBP11.98□□□□□ -0.49
USP39-206ENST00000448971 TNFAIP8L1Q8WVP5 186 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 ORAI1Q96D31 301 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 DMRTB1Q96MA1 342 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 CDCA4Q9BXL8 241 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 EXOSC4Q9NPD3 245 aaKnown RBP11.98□□□□□ -0.49
USP39-206ENST00000448971 BLOC1S6Q9UL45 172 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 GSTK1Q9Y2Q3 226 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 NOTCH1P46531 2555 aa11.98□□□□□ -0.49
USP39-206ENST00000448971 WNK1Q9H4A3 2382 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 HKR1P10072 659 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 GABRR1P24046 479 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 EEF1B2P24534 225 aaKnown RBP11.97□□□□□ -0.49
USP39-206ENST00000448971 DUSP1P28562 367 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 BDKRB2P30411 391 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 ZP1P60852 638 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 RPL31P62899 125 aaKnown RBP11.97□□□□□ -0.49
USP39-206ENST00000448971 UBA52P62987 128 aaKnown RBP11.97□□□□□ -0.49
USP39-206ENST00000448971 DOC2BQ14184 412 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 EDDM3AQ14507 147 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 SPHARQ15513 63 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 RNLSQ5VYX0 342 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 ZNF529Q6P280 563 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 SHISA2Q6UWI4 295 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 GDPD3Q7L5L3 318 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 SAXO1Q8IYX7 474 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 ZSCAN4Q8NAM6 433 aaPredicted RBP11.97□□□□□ -0.49
USP39-206ENST00000448971 OR4M1Q8NGD0 313 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 OR52N4Q8NGI2 321 aa11.97□□□□□ -0.49
USP39-206ENST00000448971 OR5M11Q96RB7 305 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms