RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TIMM50Q3ZCQ8 353 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 FOXB2Q5VYV0 432 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 CD276Q5ZPR3 534 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 CALHM1Q8IU99 346 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 NDNFQ8TB73 568 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 THRSPQ92748 146 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 ITFG2Q969R8 447 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 HIST1H2AAQ96QV6 131 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 CKLFQ9UBR5 152 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 SLC7A11Q9UPY5 501 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 GSTK1Q9Y2Q3 226 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 CCDC160A6NGH7 325 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 OR5B21A6NL26 309 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 A6NLC8 198 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 SRRM5B3KS81 715 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 HOXA3O43365 443 aaPredicted RBP11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 NDUFA2O43678 99 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 SYNGR1O43759 233 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 RHBDL1O75783 438 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 CDRT1O95170 752 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 PRKACBP22694 351 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 MYL9P24844 172 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 OR3A4PP47883 348 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 SERPINB10P48595 397 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 POU3F4P49335 361 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 MTCP1P56278 107 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 FGF12P61328 243 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 GNG3P63215 75 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 SPCS2Q15005 226 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 DEFB112Q30KQ8 113 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 FAM201AQ5SY85 155 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 HAGHLQ6PII5 290 aaPredicted RBP11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 ZNF841Q6ZN19 808 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 C11orf53Q8IXP5 236 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 TMEM86BQ8N661 226 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 OR5A2Q8NGI9 324 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 OR4F5Q8NH21 305 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 PHYHIPQ92561 330 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 ISOC1Q96CN7 298 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 BORCS8Q96FH0 119 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 KCTD7Q96MP8 289 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 OR51I2Q9H344 312 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 BEX1Q9HBH7 125 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 TMEM138Q9NPI0 162 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 SNTG1Q9NSN8 517 aa11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 SOX21Q9Y651 276 aaPredicted RBP11.38□□□□□ -0.59
PDLIM2-213ENST00000448520 TRAV1-2A0A0B4J238 106 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 A0A0G2JK05 382 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 ANGPTL7O43827 346 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 KNG1P01042 644 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 MDKP21741 143 aaPredicted RBP11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 HAAOP46952 286 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 FUT6P51993 359 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 DEFA6Q01524 100 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 KISS1Q15726 138 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 C11orf91Q3C1V1 193 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 PDLIM3Q53GG5 364 aaPredicted RBP11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 LYPD2Q6UXB3 125 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 Q6YL49 198 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 GDPGP1Q6ZNW5 385 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 LYPD6Q86Y78 171 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 JAGN1Q8N5M9 183 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 SPERTQ8NA61 448 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 SCCPDHQ8NBX0 429 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 SPSB1Q96BD6 273 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 C12orf43Q96C57 262 aaKnown RBP11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 ZNF488Q96MN9 340 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 TECTBQ96PL2 329 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 KCNK15Q9H427 330 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 FN3KRPQ9HA64 309 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 ABCB9Q9NP78 766 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 C14orf119Q9NWQ9 140 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 C1orf123Q9NWV4 160 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 RNF7Q9UBF6 113 aa11.37□□□□□ -0.59
PDLIM2-213ENST00000448520 MEGF8Q7Z7M0 2845 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 A0A0B4J203 849 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 TRAV38-1A0A0B4J264 116 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 IGKV1-12A0A0C4DH73 117 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 FAM181BA6NEQ2 426 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 H3BMQ9 156 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 LGALS8O00214 317 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 CDIPTO14735 213 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 ALX3O95076 343 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 PTBP3O95758 552 aaKnown RBP11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 IGKV1D-12P01611 117 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 ALDOBP05062 364 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 CALCBP10092 127 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 SLC2A2P11168 524 aaPredicted RBP11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 OMGP23515 440 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 ZNF93P35789 620 aaPredicted RBP11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 RPS19P39019 145 aaKnown RBP11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 MTNR1BP49286 362 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 RBP2P50120 134 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 ATP1B3P54709 279 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 TMBIM6P55061 237 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 CLDN12P56749 244 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 ZP1P60852 638 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 GMFBP60983 142 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 RPL15P61313 204 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms