RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SFT2D2O95562 160 aa12.77□□□□□ -0.36
SF1-211ENST00000448404 UBBP0CG47 229 aa12.77□□□□□ -0.36
SF1-211ENST00000448404 OR5H8P0DN80 308 aa12.77□□□□□ -0.36
SF1-211ENST00000448404 SLC22A25Q6T423 547 aa12.77□□□□□ -0.36
SF1-211ENST00000448404 C17orf78Q8N4C9 275 aa12.77□□□□□ -0.36
SF1-211ENST00000448404 UBALD1Q8TB05 177 aa12.77□□□□□ -0.36
SF1-211ENST00000448404 ANAPC10Q9UM13 185 aa12.77□□□□□ -0.36
SF1-211ENST00000448404 CACNA1DQ01668 2161 aa12.77□□□□□ -0.36
SF1-211ENST00000448404 ROS1P08922 2347 aa12.77□□□□□ -0.36
SF1-211ENST00000448404 TRAV39A0A0B4J263 110 aa12.77□□□□□ -0.37
SF1-211ENST00000448404 ABCD4O14678 606 aa12.77□□□□□ -0.37
SF1-211ENST00000448404 WT1P19544 449 aaPredicted RBP12.77□□□□□ -0.37
SF1-211ENST00000448404 PSMB6P28072 239 aa12.77□□□□□ -0.37
SF1-211ENST00000448404 HAAOP46952 286 aa12.77□□□□□ -0.37
SF1-211ENST00000448404 POLR2GP62487 172 aaKnown RBP eCLIP12.77□□□□□ -0.37
SF1-211ENST00000448404 PDZK1IP1Q13113 114 aa12.77□□□□□ -0.37
SF1-211ENST00000448404 PNLIPRP3Q17RR3 467 aa12.77□□□□□ -0.37
SF1-211ENST00000448404 ARRDC1Q8N5I2 433 aa12.77□□□□□ -0.37
SF1-211ENST00000448404 KCNRGQ8N5I3 272 aa12.77□□□□□ -0.37
SF1-211ENST00000448404 TM2D1Q9BX74 207 aa12.77□□□□□ -0.37
SF1-211ENST00000448404 NKX6-2Q9C056 277 aaPredicted RBP12.77□□□□□ -0.37
SF1-211ENST00000448404 SCGNO76038 276 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 FARS2O95363 451 aaKnown RBP12.76□□□□□ -0.37
SF1-211ENST00000448404 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 ZNF708P17019 499 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 BCL3P20749 454 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 RAB1AP62820 205 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 ANXA10Q9UJ72 324 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 FCGR3AP08637 254 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 CELA3BP08861 270 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 FPR2P25090 351 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 CHATP28329 748 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 OR5L1Q8NGL2 311 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 TMED6Q8WW62 240 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 MRPL24Q96A35 216 aaKnown RBP12.76□□□□□ -0.37
SF1-211ENST00000448404 PARP12Q9H0J9 701 aaKnown RBP12.76□□□□□ -0.37
SF1-211ENST00000448404 ZNF442Q9H7R0 627 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 PARPBPQ9NWS1 579 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 SPRR3Q9UBC9 169 aa12.76□□□□□ -0.37
SF1-211ENST00000448404 TEX13DA0A0J9YY54 714 aaPredicted RBP12.75□□□□□ -0.37
SF1-211ENST00000448404 MEX3AA1L020 520 aaKnown RBP12.75□□□□□ -0.37
SF1-211ENST00000448404 SYNGR1O43759 233 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 RCC1P18754 421 aaPredicted RBP12.75□□□□□ -0.37
SF1-211ENST00000448404 MPZP25189 248 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 ALDH3B1P43353 468 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 NSUN5P2Q63ZY6 315 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 OR2A2Q6IF42 318 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 LURAP1LQ8IV03 231 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 INO80EQ8NBZ0 244 aaPredicted RBP12.75□□□□□ -0.37
SF1-211ENST00000448404 HPSE2Q8WWQ2 592 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 TAS2R3Q9NYW6 316 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 PURGQ9UJV8 347 aaKnown RBP12.75□□□□□ -0.37
SF1-211ENST00000448404 SERPINE3A8MV23 424 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 SP1P08047 785 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 ZNF883P0CG24 379 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 FGL1Q08830 312 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 ACOT7LQ6ZUV0 252 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 PEG10Q86TG7 708 aaKnown RBP12.75□□□□□ -0.37
SF1-211ENST00000448404 ZNF100Q8IYN0 542 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 OSR2Q8N2R0 312 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 BPIFCQ8NFQ6 507 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 ZPBPQ9BS86 351 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 COA4Q9NYJ1 87 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 BCL2L11O43521 198 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 DNPH1O43598 174 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 ATG12O94817 140 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 SYNGR4O95473 234 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 APOC1P02654 83 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 FCGR2CP31995 323 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 CCL11P51671 97 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 ERVS71-1P61550 626 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 CNN3Q15417 329 aaKnown RBP12.75□□□□□ -0.37
SF1-211ENST00000448404 OR5T2Q8NGG2 359 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 SPSB1Q96BD6 273 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 APH1AQ96BI3 265 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 LHX6Q9UPM6 363 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 CEP295Q9C0D2 2601 aa12.75□□□□□ -0.37
SF1-211ENST00000448404 DIRAS3O95661 229 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
SF1-211ENST00000448404 TBPP20226 339 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 ASCL1P50553 236 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 PIGPP57054 158 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 ARG2P78540 354 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 PRDX4Q13162 271 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 TRIP6Q15654 476 aaKnown RBP12.74□□□□□ -0.37
SF1-211ENST00000448404 FAM209BQ5JX69 171 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 C2CD4CQ8TF44 421 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 BSCL2Q96G97 398 aaPredicted RBP12.74□□□□□ -0.37
SF1-211ENST00000448404 NUDT16L1Q9BRJ7 211 aaKnown RBP12.74□□□□□ -0.37
SF1-211ENST00000448404 ADAT1Q9BUB4 502 aaKnown RBP12.74□□□□□ -0.37
SF1-211ENST00000448404 TMEM231Q9H6L2 316 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 TMEM9BQ9NQ34 198 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 ASF1BQ9NVP2 202 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 B4GALT7Q9UBV7 327 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 MED19A0JLT2 244 aaPredicted RBP12.74□□□□□ -0.37
SF1-211ENST00000448404 LINC00587B1AMM8 73 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 NXPH3O95157 252 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms