RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PSG2P11465 335 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 GTF2F2P13984 249 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 ARSBP15848 533 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 AMY2BP19961 511 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 USF1P22415 310 aaPredicted RBP6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 PRDX2P32119 198 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 RANBP1P43487 201 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 CAV3P56539 151 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 FGF12P61328 243 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 LMO4P61968 165 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 QRFPP83859 136 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF146Q15072 292 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 P2RY14Q15391 338 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 SMIM21Q3B7S5 101 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 C2orf76Q3KRA6 126 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 SLC22A6Q4U2R8 563 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 HES5Q5TA89 166 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 STUMQ69YW2 141 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 AWAT2Q6E213 333 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 SPICQ8N5J4 248 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 CD177Q8N6Q3 437 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 OR10K1Q8NGX5 313 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 ANGPTL6Q8NI99 470 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 RAB2BQ8WUD1 216 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 EMG1Q92979 244 aaKnown RBP6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 FAM3DQ96BQ1 224 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 C1orf147Q96MC9 270 aaPredicted RBP6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 BCL7BQ9BQE9 202 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 REG4Q9BYZ8 158 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 SEBOXQ9HB31 216 aaPredicted RBP6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 A0A096LNT2 108 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 A0A1W2PP11 408 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 DPPA5A6NC42 116 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 CEACAM18A8MTB9 384 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 SH2D1BO14796 132 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 BPNT1O95861 308 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 TFF1P04155 84 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 SLC2A2P11168 524 aaPredicted RBP6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 PRKACAP17612 351 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 SERPINA2P20848 420 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 CPT2P23786 658 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 DUSP1P28562 367 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 GABRA2P47869 451 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 SERPINB10P48595 397 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 CAPZA1P52907 286 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 CLDN12P56749 244 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 LOXL1Q08397 574 aaPredicted RBP6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 SPCS2Q15005 226 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 DGUOKQ16854 277 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 NHLRC3Q5JS37 347 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 SPIN3Q5JUX0 258 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 IDNKQ5T6J7 187 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 SFXN4Q6P4A7 337 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 FIP1L1Q6UN15 594 aaKnown RBP6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 LYPD2Q6UXB3 125 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF788Q6ZQV5 615 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 OTOGQ6ZRI0 2925 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 DCDC5Q6ZRR9 648 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 USP43Q70EL4 1123 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 CROCCP3Q8IVE0 287 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 OSR2Q8N2R0 312 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 TMEM104Q8NE00 496 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 OR51D1Q8NGF3 324 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 OR51T1Q8NGJ9 327 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 CLDND2Q8NHS1 167 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 KCNG3Q8TAE7 436 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 NDNFQ8TB73 568 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 SLC25A46Q96AG3 418 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 ISOC1Q96CN7 298 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 DGCR14Q96DF8 476 aaKnown RBP6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 MRPS24Q96EL2 167 aaKnown RBP6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 SDSLQ96GA7 329 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 MED30Q96HR3 178 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 CCL13Q99616 98 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 GAL3ST1Q99999 423 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 RBM38Q9H0Z9 239 aaKnown RBP6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 DNTTIP1Q9H147 329 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 DCSTAMPQ9H295 470 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 BANF2Q9H503 90 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 NARFLQ9H6Q4 476 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 PATZ1Q9HBE1 687 aaKnown RBP6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 NDUFA13Q9P0J0 144 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 IL36RNQ9UBH0 155 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 KAAG1Q9UBP8 84 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 FBLN5Q9UBX5 448 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 MIOXQ9UGB7 285 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 GLS2Q9UI32 602 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 DAPK2Q9UIK4 370 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF222Q9UK12 451 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 PCDHB10Q9UN67 800 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 ST3GAL6Q9Y274 331 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 MYO9AB2RTY4 2548 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 AKAP9Q99996 3911 aa6.29□□□□□ -1.4
AC004540.1-206ENST00000448056 A0A0B4J203 849 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 SMIM31A0A1B0GVY4 71 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 CCDC160A6NGH7 325 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 TMEM14DPA8MWL7 114 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 F5H0A9 414 aaPredicted RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 F8W735 103 aaPredicted RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 H3BMQ9 156 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms