RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 CNBD2Q96M20 576 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 C1orf147Q96MC9 270 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-204ENST00000446876 SCN3BQ9NY72 215 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 TRBV23-1A0A0A0MS06 115 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 IGHV1-69DA0A0B4J2H0 117 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 A0A1W2PPK0 400 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 A0A1W2PRD5 423 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 A0A1W2PRF3 423 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 A0A1W2PRM7 423 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 MAGEA13PA6NCF6 341 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 DNAJC9-AS1A6NH13 148 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 GABRPO00591 440 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 ZNF737O75373 536 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 KDM4BO94953 1096 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 ALX3O95076 343 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 IGHV1-69P01742 117 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 CD2P06729 351 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 TMEM225BP0DP42 221 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 CELP19835 753 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 TAS2R43P59537 309 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 SLC35A2P78381 396 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 ZNF273Q14593 569 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 PDCD1Q15116 288 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 DEFB112Q30KQ8 113 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 Q8IYB0 196 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 CMTM4Q8IZR5 234 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 KIR3DL3Q8N743 410 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 MYDGFQ969H8 173 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 OR14A2Q96R54 314 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 OR5M11Q96RB7 305 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 CHST6Q9GZX3 395 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 HMG20AQ9NP66 347 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 ERGIC3Q9Y282 383 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 GSTK1Q9Y2Q3 226 aa12.18□□□□□ -0.46
HDAC4-204ENST00000446876 TRAV8-7A0A075B6U6 113 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 RNASEK-C17orf49H0YIS7 233 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 K7N7A8 449 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 SIRPB1O00241 398 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 CHRM2P08172 466 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 CCL3L1P16619 93 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 HSPA13P48723 471 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 RPL31P62899 125 aaKnown RBP12.17□□□□□ -0.46
HDAC4-204ENST00000446876 UBA52P62987 128 aaKnown RBP12.17□□□□□ -0.46
HDAC4-204ENST00000446876 BAMBIQ13145 260 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 EDDM3AQ14507 147 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 Q499Y3 187 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 YIF1BQ5BJH7 314 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 TMEM200BQ69YZ2 307 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 FIP1L1Q6UN15 594 aaKnown RBP12.17□□□□□ -0.46
HDAC4-204ENST00000446876 RBMS3Q6XE24 437 aaKnown RBP12.17□□□□□ -0.46
HDAC4-204ENST00000446876 C17orf107Q6ZR85 190 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 PNKDQ8N490 385 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 TNFAIP8L1Q8WVP5 186 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 JMJD8Q96S16 334 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 GPER1Q99527 375 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 MND1Q9BWT6 205 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 CDCA4Q9BXL8 241 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 FAM192AQ9GZU8 254 aa12.17□□□□□ -0.46
HDAC4-204ENST00000446876 LSM2Q9Y333 95 aaKnown RBP12.17□□□□□ -0.46
HDAC4-204ENST00000446876 TRIM77I1YAP6 450 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 M0R1W7 72 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 PSPNO60542 156 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 GABRR1P24046 479 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 VHLP40337 213 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 OR3A4PP47883 348 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 EDDM3BP56851 147 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 ERVFRD-1P60508 538 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 PPP3R1P63098 170 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 INSL4Q14641 139 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 IRF3Q14653 427 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 ZNF146Q15072 292 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 DDI2Q5TDH0 399 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 RNLSQ5VYX0 342 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 SAXO1Q8IYX7 474 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 TPRX1Q8N7U7 411 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 OR4S1Q8NGB4 309 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 OR10K1Q8NGX5 313 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 TNFRSF14Q92956 283 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 FAM234AQ9H0X4 552 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 TPRKBQ9Y3C4 175 aa12.16□□□□□ -0.46
HDAC4-204ENST00000446876 TRBV5-7A0A0A0MS05 114 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 A0A0U1RQK1 487 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 MAGEB3O15480 346 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 RGS10O43665 173 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 OR2H2O95918 312 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 IGFBP3P17936 291 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-204ENST00000446876 CRHBPP24387 322 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 BDKRB2P30411 391 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 SCN1BQ07699 218 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 MED22Q15528 200 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 GRK1Q15835 563 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 SPIN3Q5JUX0 258 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 GDPD3Q7L5L3 318 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 TCF23Q7RTU1 214 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 OR8H2Q8N162 312 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 ZSCAN4Q8NAM6 433 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-204ENST00000446876 SNX22Q96L94 193 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 DMRTB1Q96MA1 342 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 DERL3Q96Q80 235 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms