RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FAM87AP0C7U9 286 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 PPIAL4FP0DN26 164 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 RAB5AP20339 215 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 HOXA6P31267 233 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 MRPS11P82912 194 aaKnown RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 POM121Q96HA1 1249 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 ANGPTL4Q9BY76 406 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 OR51I2Q9H344 312 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 PPIAL4AQ9Y536 164 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 CKAP5Q14008 2032 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF716A6NP11 495 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF727A8MUV8 499 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 RER1O15258 196 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 HAND1O96004 215 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 PDLIM4P50479 330 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 WNT3P56703 355 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 WDR38Q5JTN6 314 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 TGIF2LYQ8IUE0 185 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 TGIF2LXQ8IUE1 241 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 MARS2Q96GW9 593 aaKnown RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 A0A1W2PS18 150 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 PDGFBP01127 241 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 LILRB1Q8NHL6 650 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 CSRP1P21291 193 aaKnown RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 CLDN20P56880 219 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF770Q6IQ21 691 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 OR4A4PQ8NGN8 299 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 OR2H1Q9GZK4 316 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 CFDP00746 253 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 RIPPLY2Q5TAB7 128 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 TMEM182Q6ZP80 229 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 NUDT8Q8WV74 236 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 SMOC1Q9H4F8 434 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 A0A0U1RQV5 110 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 TRIM77I1YAP6 450 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 SPRY1O43609 319 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 TUSC5Q8IXB3 177 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 MARCH1Q8TCQ1 289 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 PDCD11Q14690 1871 aaKnown RBP7.55□□□□□ -1.2
PTPN3-204ENST00000446349 GPX5O75715 221 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF90Q03938 601 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF260Q3ZCT1 412 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 GCSAMQ8N6F7 178 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 STPG3Q8N7X2 389 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 NUDCD2Q8WVJ2 157 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 AUNIPQ9H7T9 357 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 LIPGQ9Y5X9 500 aa7.55□□□□□ -1.2
PTPN3-204ENST00000446349 ASXL3Q9C0F0 2248 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 ATP6V1G2-DDX39BF2Z307 99 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 FCGR3BO75015 233 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 MOSPD3O75425 235 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 OR3A4PP47883 348 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 RTTNQ86VV8 2226 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 SCGB1D1O95968 90 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 CELA2BP08218 269 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-204ENST00000446349 FCN2Q15485 313 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 LPAR2Q9HBW0 351 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 ADGRL4Q9HBW9 690 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 PSG11Q9UQ72 335 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 RNF115Q9Y4L5 304 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 ESPL1Q14674 2120 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 SPTBP11277 2137 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 FOXH1O75593 365 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 MBPP02686 304 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-204ENST00000446349 C1QAP02745 245 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 MAGEB1P43366 347 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 BAK1Q16611 211 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 OR2B11Q5JQS5 317 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 PRSS45Q7RTY3 260 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 JMJD8Q96S16 334 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 NAA60Q9H7X0 242 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 GREB1LQ9C091 1923 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-204ENST00000446349 BRWD1Q9NSI6 2320 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 GNG7O60262 68 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 GPANK1O95872 356 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 COX5BP10606 129 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 GNG10P50151 68 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 OR5AP2Q8NGF4 316 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 FLYWCH2Q96CP2 140 aaKnown RBP7.54□□□□□ -1.2
PTPN3-204ENST00000446349 SERTM2A0A1B0GWG4 89 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 ZC3H12DA2A288 527 aaKnown RBP7.54□□□□□ -1.2
PTPN3-204ENST00000446349 EML2O95834 649 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 IGFBP1P08833 259 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-204ENST00000446349 ERGP11308 486 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 NQO2P16083 231 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 UQCC3Q6UW78 93 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 OR4Q3Q8NH05 313 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 PTX4Q96A99 478 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 OR2T8A6NH00 312 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 ACSM4P0C7M7 580 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 VDAC1P21796 283 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 SSTR2P30874 369 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 GUCA2AQ02747 115 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 ALKAL2Q6UX46 152 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF788Q6ZQV5 615 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 OR2I1PQ8NGU4 316 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 PTPMT1Q8WUK0 201 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-204ENST00000446349 DERL3Q96Q80 235 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 OR2D2Q9H210 308 aa7.54□□□□□ -1.2
PTPN3-204ENST00000446349 FXYD1O00168 92 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms