RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 RBP7Q96R05 134 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 TRIB3Q96RU7 358 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 SYT3Q9BQG1 590 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 MS4A6AQ9H2W1 248 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 CCDC167Q9P0B6 97 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 ATG2AQ2TAZ0 1938 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 A0A1B0GU03 582 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 ARPC2O15144 300 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 CRYGDP07320 174 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 BMP4P12644 408 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 TAF6P49848 677 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 CLDN6P56747 220 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 RPL31P62899 125 aaKnown RBP9.07□□□□□ -0.96
SYNE2-206ENST00000441438 ZNF404Q494X3 552 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 CRIPAKQ8N1N5 446 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 ADAD2Q8NCV1 583 aaKnown RBP9.07□□□□□ -0.96
SYNE2-206ENST00000441438 TMEM37Q8WXS4 190 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 SIGLEC8Q9NYZ4 499 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 MUTYHQ9UIF7 546 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 SLC7A7Q9UM01 511 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 PLXND1Q9Y4D7 1925 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 FXYD1O00168 92 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 CCL22O00626 93 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 HIST1H2AGP0C0S8 130 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 ABOP16442 354 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 RCC1P18754 421 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 GABRA2P47869 451 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 TMEM52BQ4KMG9 183 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 OPN5Q6U736 354 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 CXCL17Q6UXB2 119 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 CLEC20AQ6ZU45 233 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 CALHM3Q86XJ0 350 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 CLDN19Q8N6F1 224 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 HIST1H2ACQ93077 130 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 RNF183Q96D59 192 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 ZNF436Q9C0F3 470 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 HEXA-AS1Q9H8Q6 139 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 MRPL16Q9NX20 251 aaKnown RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 IDI2-AS1Q9NZ38 188 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 TRIOBPQ9H2D6 2365 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 RANBP2P49792 3224 aaKnown RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 SPAARA0A1B0GVQ0 90 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 LILRA5A6NI73 299 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 SEMG1P04279 462 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 UMODP07911 640 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 RPL13AP40429 203 aaKnown RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 MDH2P40926 338 aaKnown RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 LEPP41159 167 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 REG1BP48304 166 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 HIST1H1AQ02539 215 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 GPR50Q13585 617 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 RAB35Q15286 201 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 OR51Q1Q8NH59 317 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 RASL11BQ9BPW5 248 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 SMIM3Q9BZL3 60 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 HRASLS2Q9NWW9 162 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 GOLGA4Q13439 2230 aaKnown RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 GBF1Q92538 1859 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 A0A0J9YY10 115 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 A0A1B0GX78 115 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 IFITM10A6NMD0 228 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 F8VVB4 439 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 F8VWA3 439 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 GP2P55259 537 aaKnown RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 PCBP3P57721 371 aaKnown RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 SELENOWP63302 87 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 SRSF4Q08170 494 aaKnown RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 GUSBP1Q15486 140 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 TRMT12Q53H54 448 aaKnown RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 GSG1LQ6UXU4 331 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 KLHDC8BQ8IXV7 354 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 ZADH2Q8N4Q0 377 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 ZNF485Q8NCK3 441 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 GJC3Q8NFK1 279 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 OR7A2PQ8NGA2 310 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 OR13J1Q8NGT2 312 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 OR5W2Q8NH69 310 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 DCUN1D4Q92564 292 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 NUS1Q96E22 293 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 PCED1BQ96HM7 432 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 SLC35E1Q96K37 410 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 FANCD2OSQ96PS1 177 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 CHIAQ9BZP6 476 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 SPANXB1Q9NS25 103 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-206ENST00000441438 CBLN4Q9NTU7 201 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 PRODH2Q9UF12 536 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 TSC2P49815 1807 aa9.06□□□□□ -0.96
SYNE2-206ENST00000441438 PATJQ8NI35 1801 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 FAM95CA0A1B0GW59 222 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 C5orf67F2Z3F1 127 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 PHOX2AO14813 284 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 ATP6AP2O75787 350 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 OR4Q2P0C623 313 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 UPP1Q16831 310 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 FAM19A5Q7Z5A7 132 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-206ENST00000441438 TMEM86BQ8N661 226 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 OR8D4Q8NGM9 314 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 CLDN23Q96B33 292 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 TADA1Q96BN2 335 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms