RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SRSF4Q08170 494 aaKnown RBP3.99□□□□□ -1.77
PTPN4-206ENST00000441089 GK2Q14410 553 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-206ENST00000441089 OR8B8Q15620 311 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 UBE2V2Q15819 145 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 C2orf68Q2NKX9 166 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 ALKBH6Q3KRA9 238 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 HSD17B12Q53GQ0 312 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 DMRTC1Q5HYR2 192 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 TMEM42Q69YG0 159 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 KRT74Q7RTS7 529 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 COMMD2Q86X83 199 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 PARP16Q8N5Y8 322 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 DNAAF1Q8NEP3 725 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 OR4M2Q8NGB6 313 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 OR56B2PQ8NGI1 322 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 OR52H1Q8NGJ2 320 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 OR13C3Q8NGS6 347 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 FAM110DQ8TAY7 271 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-206ENST00000441089 SLC25A40Q8TBP6 338 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 ST8SIA2Q92186 375 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 PHYHIPQ92561 330 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 APOBEC3DQ96AK3 386 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-206ENST00000441089 FGGYQ96C11 551 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 MARS2Q96GW9 593 aaKnown RBP3.99□□□□□ -1.77
PTPN4-206ENST00000441089 KCTD7Q96MP8 289 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 OR2J1Q9GZK6 312 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 RAB1BQ9H0U4 201 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 NECAP2Q9NVZ3 263 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 PTTG2Q9NZH5 202 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 CCDC59Q9P031 241 aaKnown RBP3.99□□□□□ -1.77
PTPN4-206ENST00000441089 DHDHQ9UQ10 334 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 GSTK1Q9Y2Q3 226 aa3.99□□□□□ -1.77
PTPN4-206ENST00000441089 AK6Q9Y3D8 172 aaKnown RBP3.99□□□□□ -1.77
PTPN4-206ENST00000441089 DNAH7Q8WXX0 4024 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 CSMD3Q7Z407 3707 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 DNAH9Q9NYC9 4486 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 IGKV1-27A0A075B6S5 117 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 ARL6IP5O75915 188 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 LY86O95711 162 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 MAS1P04201 325 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 CD37P11049 281 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 ATF1P18846 271 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 RAB3BP20337 219 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 GATA3P23771 443 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 MYL9P24844 172 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 MAPK3P27361 379 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-206ENST00000441089 THBS4P35443 961 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 PSG7Q13046 419 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 PLA2G7Q13093 441 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 BAMBIQ13145 260 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 SNTB2Q13425 540 aaKnown RBP3.98□□□□□ -1.77
PTPN4-206ENST00000441089 C1QTNF12Q5T7M4 302 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 OLFML2AQ68BL7 652 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 OR2T2Q6IF00 324 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 CCBE1Q6UXH8 406 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-206ENST00000441089 FBXW12Q6X9E4 464 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 Q6ZR03 302 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 MRPL21Q7Z2W9 205 aaKnown RBP3.98□□□□□ -1.77
PTPN4-206ENST00000441089 LRP11Q86VZ4 500 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 SIGLECL1Q8N7X8 197 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 CCDC54Q8NEL0 328 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 OR1M1Q8NGA1 313 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 OR52N4Q8NGI2 321 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 OR1J1Q8NGS3 322 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 OR13C9Q8NGT0 318 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 OR5H6Q8NGV6 325 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 TBC1D15Q8TC07 691 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 KLF14Q8TD94 323 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-206ENST00000441089 HPSE2Q8WWQ2 592 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 SLC25A46Q96AG3 418 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 CMBLQ96DG6 245 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 DUX5Q96PT3 197 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 SPACA5Q96QH8 159 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 CHST5Q9GZS9 411 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 NXF2Q9GZY0 626 aaKnown RBP3.98□□□□□ -1.77
PTPN4-206ENST00000441089 TPK1Q9H3S4 243 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 KCNK15Q9H427 330 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 RGCCQ9H4X1 137 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 SP140LQ9H930 580 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 LPAR2Q9HBW0 351 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 TCF7L1Q9HCS4 588 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 GPR173Q9NS66 373 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 MYEF2Q9P2K5 600 aaKnown RBP3.98□□□□□ -1.77
PTPN4-206ENST00000441089 EIF3KQ9UBQ5 218 aaKnown RBP3.98□□□□□ -1.77
PTPN4-206ENST00000441089 FZR1Q9UM11 496 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 FOXJ3Q9UPW0 622 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 PIGLQ9Y2B2 252 aa3.98□□□□□ -1.77
PTPN4-206ENST00000441089 IGLV3-9A0A075B6K5 115 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 A0A075B6Q4 140 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF816-ZNF321PA0A0X1KG74 233 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 LCE6AA0A183 80 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CLPSL1A2RUU4 121 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 GGT3PA6NGU5 568 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 IFITM5A6NNB3 132 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 DHRS7CA6NNS2 312 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CD300LBA8K4G0 201 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF850A8MQ14 1090 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 IQCF6A8MYZ5 107 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 B9A039 149 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 H0YL77 283 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms