RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 PTPN13Q12923 2485 aa4.19□□□□□ -1.74
CCDC140-202ENST00000440903 ICE1Q9Y2F5 2266 aa4.19□□□□□ -1.74
CCDC140-202ENST00000440903 HEATR1Q9H583 2144 aaKnown RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 PKDREJQ9NTG1 2253 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 IGKV1-27A0A075B6S5 117 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 SMIM30A4D0T7 59 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A10PA6NDY2 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A18PA6NE21 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A16PA6NEW6 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A20PA6NIJ5 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A8PA6NJQ4 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A7PA6NKC0 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 OR2AT4A6NND4 320 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A22PA8MWA6 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A12PA8MX19 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A5PA8MXJ8 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A23PA8MXZ1 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM25AB3EWG3 89 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM25CB3EWG5 89 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM25GB3EWG6 89 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 TMPRSS2O15393 492 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RGS5O15539 181 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ADAM20O43506 726 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 NDUFB3O43676 98 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RP2O75695 350 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RHBDL1O75783 438 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 OR7C1O76099 320 aaPredicted RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FSTL3O95633 263 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 HAND1O96004 215 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RNASE1P07998 156 aaKnown RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 CHRM2P08172 466 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A15PP0C7V4 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A13PP0C7W8 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A14PP0C7W9 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 FAM90A24PP0C7X0 464 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ADRA2CP18825 462 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 BCL3P20749 454 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 GABRR1P24046 479 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 GIFP27352 417 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 MNDAP41218 407 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 KCNJ3P48549 501 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 NPY4RP50391 375 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RBM11P57052 281 aaKnown RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 OR10A3P58181 314 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 KRTAP10-9P60411 292 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 GNB2P62879 340 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 MPPED2Q15777 294 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 CTF1Q16619 201 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 MLANAQ16655 118 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ZNF404Q494X3 552 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 PAN3Q58A45 887 aaKnown RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 DMRTC1Q5HYR2 192 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 UBE2NLQ5JXB2 153 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ATAD3CQ5T2N8 411 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 AVPI1Q5T686 147 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 TEX36Q5VZQ5 186 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ELP2Q6IA86 826 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ASPHD2Q6ICH7 369 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RAB12Q6IQ22 244 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 BAIAP2L2Q6UXY1 529 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ACP7Q6ZNF0 438 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 LCNL1Q6ZST4 164 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 GDPD3Q7L5L3 318 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ZNF561Q8N587 486 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 GCSAMQ8N6F7 178 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 SAMD12Q8N8I0 201 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 DEFB108BQ8NET1 73 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 OR4D6Q8NGJ1 314 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 OR51T1Q8NGJ9 327 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 MCFD2Q8NI22 146 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 NDNFQ8TB73 568 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 LGALS14Q8TCE9 139 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 C15orf40Q8WUR7 153 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 IGFBPL1Q8WX77 278 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RAB40AQ8WXH6 277 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 YIPF5Q969M3 257 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 PTX4Q96A99 478 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 DGCR14Q96DF8 476 aaKnown RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 NEIL1Q96FI4 390 aaPredicted RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 SELENOIQ9C0D9 397 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 BPESC1Q9GZL8 116 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 NAA50Q9GZZ1 169 aaKnown RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 LIME1Q9H400 295 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 NARFLQ9H6Q4 476 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 HMG20AQ9NP66 347 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 DIABLOQ9NR28 239 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RBFOX1Q9NWB1 397 aaKnown RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RHBDL2Q9NX52 303 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 TREM2Q9NZC2 230 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RABL2AQ9UBK7 228 aaPredicted RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 LPAR3Q9UBY5 353 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 CLN8Q9UBY8 286 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ITGB1BP2Q9UKP3 347 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RABL2BQ9UNT1 228 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 ST3GAL6Q9Y274 331 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 CEPT1Q9Y6K0 416 aa4.18□□□□□ -1.74
CCDC140-202ENST00000440903 RAI1Q7Z5J4 1906 aaPredicted RBP4.18□□□□□ -1.74
CCDC140-202ENST00000440903 PLCE1Q9P212 2302 aa4.17□□□□□ -1.74
CCDC140-202ENST00000440903 CADP27708 2225 aa4.17□□□□□ -1.74
CCDC140-202ENST00000440903 IGHV3OR15-7A0A075B7D8 119 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms