RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 BLMHQ13867 455 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 SLC9A3R2Q15599 337 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 KISS1Q15726 138 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 TMEM200BQ69YZ2 307 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 DMKNQ6E0U4 476 aaPredicted RBP19.39■□□□□ 0.69
VARS-217ENST00000440048 FIP1L1Q6UN15 594 aaKnown RBP19.39■□□□□ 0.69
VARS-217ENST00000440048 ZFP41Q8N8Y5 198 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 GHSRQ92847 366 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 METTL8Q9H825 291 aaKnown RBP19.39■□□□□ 0.69
VARS-217ENST00000440048 ZMAT3Q9HA38 289 aaKnown RBP19.39■□□□□ 0.69
VARS-217ENST00000440048 SEBOXQ9HB31 216 aaPredicted RBP19.39■□□□□ 0.69
VARS-217ENST00000440048 TAS2R4Q9NYW5 299 aa19.39■□□□□ 0.69
VARS-217ENST00000440048 CLDN34H7C241 214 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 KDM4BO94953 1096 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 CD2P06729 351 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 RAB3AP20336 220 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 DUSP1P28562 367 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 KLRD1Q13241 179 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 C6orf141Q5SZD1 244 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 SAXO1Q8IYX7 474 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 PIP4P2Q8N4L2 257 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 OR51A2Q8NGJ7 313 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 OR13C5Q8NGS8 318 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 TMEM106AQ96A25 262 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 UNKLQ9H9P5 680 aaKnown RBP19.38■□□□□ 0.69
VARS-217ENST00000440048 HMG20AQ9NP66 347 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 NOX4Q9NPH5 578 aa19.38■□□□□ 0.69
VARS-217ENST00000440048 TMEM82A0PJX8 343 aa19.37■□□□□ 0.69
VARS-217ENST00000440048 H0YHG0 523 aa19.37■□□□□ 0.69
VARS-217ENST00000440048 SNU13P55769 128 aaKnown RBP19.37■□□□□ 0.69
VARS-217ENST00000440048 ZP1P60852 638 aa19.37■□□□□ 0.69
VARS-217ENST00000440048 ZNF146Q15072 292 aa19.37■□□□□ 0.69
VARS-217ENST00000440048 Q6YL49 198 aa19.37■□□□□ 0.69
VARS-217ENST00000440048 ZSCAN4Q8NAM6 433 aaPredicted RBP19.37■□□□□ 0.69
VARS-217ENST00000440048 SNX22Q96L94 193 aa19.37■□□□□ 0.69
VARS-217ENST00000440048 A0A0U1RQK1 487 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 TMEM89A2RUT3 159 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 MYL12BO14950 172 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 HOXA3O43365 443 aaPredicted RBP19.36■□□□□ 0.69
VARS-217ENST00000440048 RNASE1P07998 156 aaKnown RBP19.36■□□□□ 0.69
VARS-217ENST00000440048 TMEM225BP0DP42 221 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 GUCA2AQ02747 115 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 DOC2BQ14184 412 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 SPIN3Q5JUX0 258 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 NCR3LG1Q68D85 454 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 C17orf107Q6ZR85 190 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 OR8H2Q8N162 312 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 TBC1D15Q8TC07 691 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 GCDHQ92947 438 aaPredicted RBP19.36■□□□□ 0.69
VARS-217ENST00000440048 SLC25A28Q96A46 364 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 PGLYRP3Q96LB9 341 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 VCX3BQ9H321 246 aa19.36■□□□□ 0.69
VARS-217ENST00000440048 TRBV5-5A0A0J9YX44 114 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 A0A1W2PPH5 198 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 A0A1W2PRD5 423 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 A0A1W2PRF3 423 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 A0A1W2PRM7 423 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 HAX1O00165 279 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 MAGEB3O15480 346 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 CDK1P06493 297 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 WNT4P56705 351 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 TAS2R43P59537 309 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 RPS11P62280 158 aaKnown RBP eCLIP19.35■□□□□ 0.69
VARS-217ENST00000440048 ZNF273Q14593 569 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 C12orf54Q6X4T0 127 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 GDPD3Q7L5L3 318 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 SATL1Q86VE3 508 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 NANOGP1Q8N7R0 232 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 OR5D13Q8NGL4 314 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 RHOFQ9HBH0 211 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 GLS2Q9UI32 602 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 GSTK1Q9Y2Q3 226 aa19.35■□□□□ 0.69
VARS-217ENST00000440048 PNMA8CA0A1B0GUJ8 204 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 PTGES3LE9PB15 166 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 NPFFO15130 113 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 MELTFP08582 738 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 CCL3L1P16619 93 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 GABRR1P24046 479 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 EEF1B2P24534 225 aaKnown RBP19.34■□□□□ 0.69
VARS-217ENST00000440048 UBE2E1P51965 193 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 EDDM3BP56851 147 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 YIF1BQ5BJH7 314 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 HCP5Q6MZN7 132 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 PNKDQ8N490 385 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 C11orf42Q8N5U0 333 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 OR52N4Q8NGI2 321 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 ORAI1Q96D31 301 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 CPNE2Q96FN4 548 aaPredicted RBP19.34■□□□□ 0.69
VARS-217ENST00000440048 CHST6Q9GZX3 395 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 ERGIC3Q9Y282 383 aa19.34■□□□□ 0.69
VARS-217ENST00000440048 GABRPO00591 440 aa19.33■□□□□ 0.68
VARS-217ENST00000440048 SH2D1BO14796 132 aa19.33■□□□□ 0.68
VARS-217ENST00000440048 PSPNO60542 156 aa19.33■□□□□ 0.68
VARS-217ENST00000440048 ALDOBP05062 364 aa19.33■□□□□ 0.68
VARS-217ENST00000440048 MYF6P23409 242 aa19.33■□□□□ 0.68
VARS-217ENST00000440048 EDDM3AQ14507 147 aa19.33■□□□□ 0.68
VARS-217ENST00000440048 GRK1Q15835 563 aa19.33■□□□□ 0.68
VARS-217ENST00000440048 GPER1Q99527 375 aa19.33■□□□□ 0.68
VARS-217ENST00000440048 EXOSC4Q9NPD3 245 aaKnown RBP19.33■□□□□ 0.68
VARS-217ENST00000440048 SCN3BQ9NY72 215 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms