RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 GRK1Q15835 563 aa15.28■□□□□ 0.04
CCDC78-204ENST00000439619 ASPHD2Q6ICH7 369 aa15.28■□□□□ 0.04
CCDC78-204ENST00000439619 MALSU1Q96EH3 234 aa15.28■□□□□ 0.04
CCDC78-204ENST00000439619 ADAT3Q96EY9 351 aaPredicted RBP15.28■□□□□ 0.04
CCDC78-204ENST00000439619 OPALINQ96PE5 141 aa15.28■□□□□ 0.04
CCDC78-204ENST00000439619 PITPNC1Q9UKF7 332 aa15.28■□□□□ 0.04
CCDC78-204ENST00000439619 FUOMA2VDF0 154 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 F8VVB4 439 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 F8VWA3 439 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 H3BNX3 289 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 J3QRE1 110 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 SH2D1BO14796 132 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 IGHV1-8P0DP01 117 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 PRKACAP17612 351 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 KIR2DS4P43632 304 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 KRTAP10-3P60369 221 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 DEFA6Q01524 100 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 ZBTB49Q6ZSB9 765 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 TRAPPC6BQ86SZ2 158 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 C4orf36Q96KX1 117 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 MBOAT4Q96T53 435 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 CDCA4Q9BXL8 241 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 RHOFQ9HBH0 211 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 EXOGQ9Y2C4 368 aaKnown RBP15.27■□□□□ 0.04
CCDC78-204ENST00000439619 LINC00312Q9Y6C7 94 aa15.27■□□□□ 0.04
CCDC78-204ENST00000439619 VGLL3A8MV65 326 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 MGST3O14880 152 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 DLX6P56179 175 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 ZNF91Q05481 1191 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 PDZK1IP1Q13113 114 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 ALKBH1Q13686 389 aaKnown RBP15.26■□□□□ 0.03
CCDC78-204ENST00000439619 GALEQ14376 348 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 ZNF146Q15072 292 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 SYS1Q8N2H4 156 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 OR11H6Q8NGC7 330 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 RPS4Y2Q8TD47 263 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 HAVCR2Q8TDQ0 301 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 ALG8Q9BVK2 526 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 COMMD4Q9H0A8 199 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 EXOSC4Q9NPD3 245 aaKnown RBP15.26■□□□□ 0.03
CCDC78-204ENST00000439619 INPP5EQ9NRR6 644 aa15.26■□□□□ 0.03
CCDC78-204ENST00000439619 RBFOX1Q9NWB1 397 aaKnown RBP15.26■□□□□ 0.03
CCDC78-204ENST00000439619 IGKV1-9A0A0C4DH69 117 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 TMEM82A0PJX8 343 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 FAM90A8PA6NJQ4 464 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 BCL3P20749 454 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 NPBWR2P48146 333 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 NANOS3P60323 173 aaKnown RBP15.25■□□□□ 0.03
CCDC78-204ENST00000439619 HERPUD1Q15011 391 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 FAM189A2Q15884 450 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 ZNF626Q68DY1 528 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 OR5D14Q8NGL3 314 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 LGALS12Q96DT0 336 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 PELI1Q96FA3 418 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 CPNE2Q96FN4 548 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-204ENST00000439619 AJUBAQ96IF1 538 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 NKX3-1Q99801 234 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-204ENST00000439619 CHST6Q9GZX3 395 aa15.25■□□□□ 0.03
CCDC78-204ENST00000439619 KCNAB3O43448 404 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 MT-ND2P03891 347 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 CSF1P09603 554 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 CCDC159P0C7I6 412 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 DBTP11182 482 aaKnown RBP15.24■□□□□ 0.03
CCDC78-204ENST00000439619 DUSP1P28562 367 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 ERP29P30040 261 aaKnown RBP15.24■□□□□ 0.03
CCDC78-204ENST00000439619 SNU13P55769 128 aaKnown RBP15.24■□□□□ 0.03
CCDC78-204ENST00000439619 RAB40BQ12829 278 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 SSX2Q16385 188 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 MINOS1Q5TGZ0 78 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 LHFPL4Q7Z7J7 247 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 LHFPL3Q86UP9 236 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 SERPINA12Q8IW75 414 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 OR13C9Q8NGT0 318 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 RNF166Q96A37 237 aaPredicted RBP15.24■□□□□ 0.03
CCDC78-204ENST00000439619 GAL3ST2Q9H3Q3 398 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 ZCCHC4Q9H5U6 513 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 HMG20AQ9NP66 347 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 GSTK1Q9Y2Q3 226 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 UBE2J1Q9Y385 318 aaPredicted RBP15.24■□□□□ 0.03
CCDC78-204ENST00000439619 RPL36Q9Y3U8 105 aaKnown RBP15.24■□□□□ 0.03
CCDC78-204ENST00000439619 SESN1Q9Y6P5 492 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 MINOS1-NBL1R4GNA1 71 aa15.24■□□□□ 0.03
CCDC78-204ENST00000439619 TRGV10A0A0A0MS01 117 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 MEX3AA1L020 520 aaKnown RBP15.23■□□□□ 0.03
CCDC78-204ENST00000439619 TMEM212A6NML5 194 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 OR4C45A6NMZ5 311 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 ODF3BA8MYP8 253 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 EBAG9O00559 213 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 IGHA1P01876 353 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 HCKP08631 526 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 EFNB2P52799 333 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 GBX2P52951 348 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-204ENST00000439619 P2RX3P56373 397 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 IL18R1Q13478 541 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 KLHL22Q53GT1 634 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 PLA1AQ53H76 456 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 OR52W1Q6IF63 320 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 SAXO1Q8IYX7 474 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 NDNFQ8TB73 568 aa15.23■□□□□ 0.03
CCDC78-204ENST00000439619 RFT1Q96AA3 541 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms