RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 DYNAPQ8N1N2 210 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR11H6Q8NGC7 330 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR51A4Q8NGJ6 313 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR10AC1Q8NH08 325 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 SPSB1Q96BD6 273 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 RANBP3Q9H6Z4 567 aaPredicted RBP16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 RAB18Q9NP72 206 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 HHLA2Q9UM44 414 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 TBL2Q9Y4P3 447 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 CMYA5Q8N3K9 4069 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 J3QLW9 94 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 CHST1O43916 411 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 PSPNO60542 156 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 TSPAN15O95858 294 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 CYB5AP00167 134 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 HTR1AP08908 422 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 ZNF19P17023 458 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 BCL3P20749 454 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 DUSP1P28562 367 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 POU3F4P49335 361 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 ACTA2P62736 377 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 ACTG2P63267 376 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 PDZK1IP1Q13113 114 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 LIAT1Q6ZQX7 453 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 CCDC121Q6ZUS5 278 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 LHFPL2Q6ZUX7 228 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR4C13Q8NGP0 309 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR13D1Q8NGV5 346 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 C4orf36Q96KX1 117 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 ZNF714Q96N38 554 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 GMPPBQ9Y5P6 360 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 LINC00312Q9Y6C7 94 aa16.43■□□□□ 0.22
NCKIPSD-206ENST00000439518 hADV38S2A0JD32 116 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 SNTNA6NMZ2 147 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 MT-ND2P03891 347 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 ARG1P05089 322 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 GABRR1P24046 479 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 PEX2P28328 305 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 GALEQ14376 348 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 EDDM3AQ14507 147 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 GRK1Q15835 563 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 SPIN3Q5JUX0 258 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 C11orf88Q6PI97 169 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR4S1Q8NGB4 309 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 RHOXF1Q8NHV9 184 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 FOXRED1Q96CU9 486 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 MALSU1Q96EH3 234 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 OPALINQ96PE5 141 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 CHST6Q9GZX3 395 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 HMG20AQ9NP66 347 aa16.42■□□□□ 0.22
NCKIPSD-206ENST00000439518 IGKV1-12A0A0C4DH73 117 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 IGKV1D-12P01611 117 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 CALCBP10092 127 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 DBTP11182 482 aaKnown RBP16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 PRKACAP17612 351 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR3A1P47881 315 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 ALKBH1Q13686 389 aaKnown RBP16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 PDLIM3Q53GG5 364 aaPredicted RBP16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 RNF144BQ7Z419 303 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 LHFPL3Q86UP9 236 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 C10orf67Q8IYJ2 551 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 SYS1Q8N2H4 156 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 TPRX1Q8N7U7 411 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 RFT1Q96AA3 541 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 SLC29A1Q99808 456 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 ZNF649Q9BS31 505 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 CDCA4Q9BXL8 241 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 NPFFR1Q9GZQ6 430 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 MYRFQ9Y2G1 1151 aa16.41■□□□□ 0.22
NCKIPSD-206ENST00000439518 MGST3O14880 152 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 ERP29P30040 261 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 RAB13P51153 203 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 HERPUD1Q15011 391 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 SSX2Q16385 188 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 C2orf68Q2NKX9 166 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 CCBE1Q6UXH8 406 aaPredicted RBP16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 ZNF676Q8N7Q3 588 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR13C3Q8NGS6 347 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR13C9Q8NGT0 318 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR2T6Q8NHC8 308 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 MRPL48Q96GC5 212 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 C9orf16Q9BUW7 83 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 ALG8Q9BVK2 526 aa16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 ISG20L2Q9H9L3 353 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-206ENST00000439518 MPZL2O60487 215 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 KDM4BO94953 1096 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 P2RX3P56373 397 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 PLA1AQ53H76 456 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 DTX3Q8N9I9 347 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 CFHR4Q92496 578 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 SPACA5Q96QH8 159 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 MYCBPQ99417 103 aaPredicted RBP16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 COMMD4Q9H0A8 199 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 AMBNQ9NP70 447 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 GLS2Q9UI32 602 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 TCF19Q9Y242 345 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 SESN1Q9Y6P5 492 aa16.39■□□□□ 0.21
NCKIPSD-206ENST00000439518 A6NDX4 124 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 E9PI62 339 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 SH2D1BO14796 132 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms