RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ATP6V1FQ16864 119 aa13.93□□□□□ -0.18
DHFR-201ENST00000439211 PRTGQ2VWP7 1150 aa13.93□□□□□ -0.18
DHFR-201ENST00000439211 OR1N1Q8NGS0 311 aa13.93□□□□□ -0.18
DHFR-201ENST00000439211 PARD6GQ9BYG4 376 aaPredicted RBP13.93□□□□□ -0.18
DHFR-201ENST00000439211 FUT9Q9Y231 359 aa13.93□□□□□ -0.18
DHFR-201ENST00000439211 SDK2Q58EX2 2172 aa13.93□□□□□ -0.18
DHFR-201ENST00000439211 SEC11BP0C7V7 166 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 DANCRP0C864 163 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 GABRR1P24046 479 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 CCKARP32238 428 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 GABRA4P48169 554 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 UCP3P55916 312 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 COL10A1Q03692 680 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 CHRFAM7AQ494W8 412 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 ABHD12BQ7Z5M8 362 aaPredicted RBP13.92□□□□□ -0.18
DHFR-201ENST00000439211 MCEMP1Q8IX19 187 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 OR5D18Q8NGL1 313 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 TOMM40LQ969M1 308 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 PLEKHA2Q9HB19 425 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 RPS4XP62701 263 aaKnown RBP13.92□□□□□ -0.18
DHFR-201ENST00000439211 SRSF4Q08170 494 aaKnown RBP13.92□□□□□ -0.18
DHFR-201ENST00000439211 ZNF709Q8N972 641 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 EPOPA6NHQ4 379 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 H7BYZ3 331 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 ITGB1BP1O14713 200 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 CIDEAO60543 219 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 FOLR1P15328 257 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 RND3P61587 244 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 HIST1H3AP68431 136 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 OR4X1Q8NH49 305 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 OR52N5Q8NH56 324 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 PTPMT1Q8WUK0 201 aaPredicted RBP13.92□□□□□ -0.18
DHFR-201ENST00000439211 SAMD10Q9BYL1 202 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 SLC26A1Q9H2B4 701 aa13.92□□□□□ -0.18
DHFR-201ENST00000439211 TRBV5-5A0A0J9YX44 114 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 SHISA8B8ZZ34 492 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 IL2RAP01589 272 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 CD1AP06126 327 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 MELTFP08582 738 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 ZNF735P0CB33 412 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 SFTPDP35247 375 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 SLC37A1P57057 533 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 CLRN1P58418 232 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 RAB30Q15771 203 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 C5orf24Q7Z6I8 188 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 RNF128Q8TEB7 428 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 ERGIC1Q969X5 290 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 ALKBH7Q9BT30 221 aaPredicted RBP13.91□□□□□ -0.18
DHFR-201ENST00000439211 TXNIPQ9H3M7 391 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 B3GALT1Q9Y5Z6 326 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 GAPDHP04406 335 aaKnown RBP13.91□□□□□ -0.18
DHFR-201ENST00000439211 HLA-DOBP13765 273 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 MLF1P58340 268 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 FBXW12Q6X9E4 464 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 TMPRSS7Q7RTY8 843 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 OR1L6Q8NGR2 347 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 SLC17A5Q9NRA2 495 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 MRPS18CQ9Y3D5 142 aaKnown RBP13.91□□□□□ -0.18
DHFR-201ENST00000439211 VSTM2BA6NLU5 285 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 OPN1MWP04001 364 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 OPN1MW2P0DN77 364 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 OPN1MW3P0DN78 364 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 WNT5AP41221 380 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 OR1D5P58170 312 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 SGCBQ16585 318 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 CPEB2Q7Z5Q1 589 aaKnown RBP13.91□□□□□ -0.18
DHFR-201ENST00000439211 SULF2Q8IWU5 870 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 ASB5Q8WWX0 329 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 CORO2AQ92828 525 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 BANF2Q9H503 90 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 METTL7AQ9H8H3 244 aa13.91□□□□□ -0.18
DHFR-201ENST00000439211 ABCA7Q8IZY2 2146 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 TRBV6-7A0A0A0MS04 114 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 TRBV11-1A0A0K0K1C0 115 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 FAM221AA4D161 298 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 NXPH2O95156 264 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 ELLP55199 621 aaPredicted RBP13.9□□□□□ -0.18
DHFR-201ENST00000439211 BIDP55957 195 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 MRPS34P82930 218 aaKnown RBP13.9□□□□□ -0.18
DHFR-201ENST00000439211 RIPPLY2Q5TAB7 128 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 IL22RA1Q8N6P7 574 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 OR4D6Q8NGJ1 314 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 S1PR5Q9H228 398 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 ZNF552Q9H707 407 aaPredicted RBP13.9□□□□□ -0.18
DHFR-201ENST00000439211 FOXD3Q9UJU5 478 aaPredicted RBP13.9□□□□□ -0.18
DHFR-201ENST00000439211 MMP17Q9ULZ9 603 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 MRPS18BQ9Y676 258 aaKnown RBP13.9□□□□□ -0.18
DHFR-201ENST00000439211 KIAA1549LQ6ZVL6 1849 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 BLACEA4D250 179 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 ENDOGQ14249 297 aaKnown RBP13.9□□□□□ -0.18
DHFR-201ENST00000439211 TMEM183BQ1AE95 376 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 FAM69BQ5VUD6 431 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 GPX7Q96SL4 187 aaPredicted RBP13.9□□□□□ -0.18
DHFR-201ENST00000439211 E5RGE8 158 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 CD38P28907 300 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 CEACAM8P31997 349 aaPredicted RBP13.9□□□□□ -0.18
DHFR-201ENST00000439211 CEACAM6P40199 344 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 ANKRD55Q3KP44 614 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 OR5D14Q8NGL3 314 aa13.9□□□□□ -0.18
DHFR-201ENST00000439211 STT3BQ8TCJ2 826 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms