RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 RAB3AP20336 220 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 UBE2E1P51965 193 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 ZNF146Q15072 292 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 GDPD3Q7L5L3 318 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 OR8H2Q8N162 312 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 ZSCAN4Q8NAM6 433 aaPredicted RBP20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 OR4M1Q8NGD0 313 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 SSMEM1Q8WWF3 244 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 TNFRSF14Q92956 283 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 SNX22Q96L94 193 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 PCDHGB5Q9Y5G0 923 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 POMT1Q9Y6A1 747 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 A0A0U1RQK1 487 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 OGG1O15527 345 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 HKR1P10072 659 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 PRKACAP17612 351 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 SOX2P48431 317 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 KISS1Q15726 138 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 TMEM200BQ69YZ2 307 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 STX19Q8N4C7 294 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 PIP4P2Q8N4L2 257 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 BPIFB6Q8NFQ5 453 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 OR5D18Q8NGL1 313 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 RGP1Q92546 391 aaPredicted RBP20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 HMG20AQ9NP66 347 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 PSORS1C1Q9UIG5 152 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 ZNF281Q9Y2X9 895 aa20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 SF3B6Q9Y3B4 125 aaKnown RBP20.27■□□□□ 0.84
RAPGEF1-206ENST00000438647 NPFFO15130 113 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 ANGPTL7O43827 346 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 XPNPEP2O43895 674 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 KDM4BO94953 1096 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 MELTFP08582 738 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 FBP1P09467 338 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 TAS2R43P59537 309 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 ACSM1Q08AH1 577 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 FOXL1Q12952 345 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 LAIR2Q6ISS4 152 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 C16orf87Q6PH81 154 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 AHSA2Q719I0 299 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 PPP1R35Q8TAP8 253 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 TMEM106AQ96A25 262 aa20.26■□□□□ 0.83
RAPGEF1-206ENST00000438647 HAX1O00165 279 aa20.25■□□□□ 0.83
RAPGEF1-206ENST00000438647 MYL12BO14950 172 aa20.25■□□□□ 0.83
RAPGEF1-206ENST00000438647 GABRR1P24046 479 aa20.25■□□□□ 0.83
RAPGEF1-206ENST00000438647 EDDM3BP56851 147 aa20.25■□□□□ 0.83
RAPGEF1-206ENST00000438647 KLRD1Q13241 179 aa20.25■□□□□ 0.83
RAPGEF1-206ENST00000438647 ZNF529Q6P280 563 aa20.25■□□□□ 0.83
RAPGEF1-206ENST00000438647 LDLRAD3Q86YD5 345 aa20.25■□□□□ 0.83
RAPGEF1-206ENST00000438647 VCX3BQ9H321 246 aa20.25■□□□□ 0.83
RAPGEF1-206ENST00000438647 IL36RNQ9UBH0 155 aa20.25■□□□□ 0.83
RAPGEF1-206ENST00000438647 IGKV1-12A0A0C4DH73 117 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 SH2D1BO14796 132 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 LALBAP00709 142 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 IGKV1D-12P01611 117 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 TMEM225BP0DP42 221 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 DLX1P56177 255 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 PPP3R1P63098 170 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 PRB3Q04118 309 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 DMKNQ6E0U4 476 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 ZNF485Q8NCK3 441 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 GHSRQ92847 366 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 GPER1Q99527 375 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 HEXA-AS1Q9H8Q6 139 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 EXOSC4Q9NPD3 245 aaKnown RBP20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 TAS2R4Q9NYW5 299 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 GSTK1Q9Y2Q3 226 aa20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 SIRT4Q9Y6E7 314 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF1-206ENST00000438647 TMEM82A0PJX8 343 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 MEIOCA2RUB1 952 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 PAHP00439 452 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 DUSP1P28562 367 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 BMXP51813 675 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 SNU13P55769 128 aaKnown RBP20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 ERVFRD-1P60508 538 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 ZP1P60852 638 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 MEF2CQ06413 473 aaPredicted RBP20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 ZNF273Q14593 569 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 GRK1Q15835 563 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 AWAT1Q58HT5 328 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 YIF1BQ5BJH7 314 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 C17orf107Q6ZR85 190 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 C3orf56Q8N813 242 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 NRG4Q8WWG1 115 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 DPAGT1Q9H3H5 408 aa20.23■□□□□ 0.83
RAPGEF1-206ENST00000438647 H0YHG0 523 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 CALCBP10092 127 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 CCL3L1P16619 93 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 C21orf33P30042 268 aaPredicted RBP20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 SAA4P35542 130 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 AQP4P55087 323 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 WNT4P56705 351 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 EDDM3AQ14507 147 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 MIDNQ504T8 468 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 CRIP3Q6Q6R5 217 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 RNF144BQ7Z419 303 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 PXT1Q8NFP0 134 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 TNFRSF19Q9NS68 423 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 FKBP14Q9NWM8 211 aa20.22■□□□□ 0.83
RAPGEF1-206ENST00000438647 ERGIC3Q9Y282 383 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms