RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 MMP26Q9NRE1 261 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 KCNMB2Q9Y691 235 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 SLC37A1P57057 533 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 CTF1Q16619 201 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 OR5R1Q8NH85 324 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 MTFP1Q9UDX5 166 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 LPAR6P43657 344 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 SRSF5Q13243 272 aaKnown RBP14.05□□□□□ -0.16
PTPN13-204ENST00000436978 PLAC9Q5JTB6 97 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 ATP5SQ99766 215 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 PLEKHB1Q9UF11 243 aaPredicted RBP14.05□□□□□ -0.16
PTPN13-204ENST00000436978 HOXB3P14651 431 aaPredicted RBP14.05□□□□□ -0.16
PTPN13-204ENST00000436978 SLC38A11Q08AI6 406 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 OR2M7Q8NG81 312 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 FSCN3Q9NQT6 498 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 CTLA4P16410 223 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 ZNF441Q8N8Z8 693 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 ASB5Q8WWX0 329 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 NPTNQ9Y639 398 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 SFTPA1Q8IWL2 248 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 PIK3IP1Q96FE7 263 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 DEFB108AA8MXU0 73 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 SFT2D2O95562 160 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 RHOBP62745 196 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 MOGAT1Q96PD6 335 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 TMEM231Q9H6L2 316 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 C1RLQ9NZP8 487 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 THADAQ6YHU6 1953 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 IGHA2P01877 340 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 IL13RA2Q14627 380 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 EID2BQ96D98 161 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 CYB5R1Q9UHQ9 305 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 STARD10Q9Y365 291 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 LIFP15018 202 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 INO80CQ6PI98 192 aaPredicted RBP14.04□□□□□ -0.16
PTPN13-204ENST00000436978 OCEL1Q9H607 264 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 OR2I1PQ8NGU4 316 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 RASL12Q9NYN1 266 aa14.04□□□□□ -0.16
PTPN13-204ENST00000436978 CST4P01036 141 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 ZNF574Q6ZN55 896 aaPredicted RBP14.03□□□□□ -0.16
PTPN13-204ENST00000436978 SLC25A40Q8TBP6 338 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 SH2D2AQ9NP31 389 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 C9orf170A2RU37 121 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 MSRB3Q8IXL7 192 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 C3orf80F5H4A9 247 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 F2RL2O00254 374 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 SUMO1P63165 101 aaKnown RBP14.03□□□□□ -0.16
PTPN13-204ENST00000436978 FAHD2BQ6P2I3 314 aaPredicted RBP14.03□□□□□ -0.16
PTPN13-204ENST00000436978 OR52L2PQ8NGH6 319 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 FAHD2AQ96GK7 314 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 PECRQ9BY49 303 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 OR2M5A3KFT3 312 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 GNG4P50150 75 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 SPICQ8N5J4 248 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 C6orf201Q7Z4U5 140 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 HAND1O96004 215 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 TMPRSS3P57727 454 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 COL19A1Q14993 1142 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 ORAI1Q96D31 301 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 RASL11BQ9BPW5 248 aa14.03□□□□□ -0.16
PTPN13-204ENST00000436978 MLF1P58340 268 aa14.02□□□□□ -0.16
PTPN13-204ENST00000436978 MAP6Q96JE9 813 aa14.02□□□□□ -0.16
PTPN13-204ENST00000436978 TCRBV16S1A1N1A0A5B0 115 aa14.02□□□□□ -0.16
PTPN13-204ENST00000436978 ALX3O95076 343 aa14.02□□□□□ -0.16
PTPN13-204ENST00000436978 NTF3P20783 257 aa14.02□□□□□ -0.16
PTPN13-204ENST00000436978 ACP1P24666 158 aa14.02□□□□□ -0.16
PTPN13-204ENST00000436978 TUSC5Q8IXB3 177 aa14.02□□□□□ -0.16
PTPN13-204ENST00000436978 CCL2P13500 99 aa14.02□□□□□ -0.16
PTPN13-204ENST00000436978 RANP62826 216 aaKnown RBP14.02□□□□□ -0.16
PTPN13-204ENST00000436978 ID4P47928 161 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 NTMQ9P121 344 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 ZSWIM8A7E2V4 1837 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 ORM1P02763 201 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 OR1L1Q8NH94 360 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 TMEM18Q96B42 140 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 CYR61O00622 381 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 SOX15O60248 233 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 EXOSC2Q13868 293 aaKnown RBP14.02□□□□□ -0.17
PTPN13-204ENST00000436978 DDA1Q9BW61 102 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 ZNF107Q9UII5 783 aaPredicted RBP14.02□□□□□ -0.17
PTPN13-204ENST00000436978 TRIM77I1YAP6 450 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 SLC25A5P05141 298 aaKnown RBP14.02□□□□□ -0.17
PTPN13-204ENST00000436978 COX7A1P24310 79 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 SFTPA2Q8IWL1 248 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 MRGPRDQ8TDS7 321 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 GPR137Q96N19 417 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 BOLA1Q9Y3E2 137 aa14.02□□□□□ -0.17
PTPN13-204ENST00000436978 B3GNTL1Q67FW5 361 aaPredicted RBP14.01□□□□□ -0.17
PTPN13-204ENST00000436978 GLCCI1Q86VQ1 547 aa14.01□□□□□ -0.17
PTPN13-204ENST00000436978 FAM109BQ6ICB4 259 aaPredicted RBP14.01□□□□□ -0.17
PTPN13-204ENST00000436978 MRM1Q6IN84 353 aaKnown RBP14.01□□□□□ -0.17
PTPN13-204ENST00000436978 OR2H1Q9GZK4 316 aa14.01□□□□□ -0.17
PTPN13-204ENST00000436978 MANBALQ9NQG1 85 aa14.01□□□□□ -0.17
PTPN13-204ENST00000436978 CACNG5Q9UF02 275 aa14.01□□□□□ -0.17
PTPN13-204ENST00000436978 AMTP48728 403 aa14.01□□□□□ -0.17
PTPN13-204ENST00000436978 CST7O76096 145 aa14.01□□□□□ -0.17
PTPN13-204ENST00000436978 PMP22Q01453 160 aa14.01□□□□□ -0.17
PTPN13-204ENST00000436978 FABP9Q0Z7S8 132 aa14.01□□□□□ -0.17
PTPN13-204ENST00000436978 ARL2-SNX15V9GYD0 113 aa14.01□□□□□ -0.17
PTPN13-204ENST00000436978 ZNF320A2RRD8 509 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms