RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	MSI2	Q96DH6	328 aa	Known RBP	13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SLC2A9	Q9NRM0	540 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	UQCC1	Q9NVA1	299 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	BOK	Q9UMX3	212 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	MBP	P02686	304 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FUT3	P21217	361 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ABCA11P	Q4W5N1	156 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	BRICD5	Q6PL45	260 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	BTNL8	Q6UX41	500 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	LIAT1	Q6ZQX7	453 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PIGC	Q92535	297 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	RSRP1	Q9BUV0	290 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TLNRD1	Q9H1K6	362 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	STARD10	Q9Y365	291 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A10P	A6NDY2	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A18P	A6NE21	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A16P	A6NEW6	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A20P	A6NIJ5	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A8P	A6NJQ4	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A7P	A6NKC0	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A22P	A8MWA6	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A12P	A8MX19	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A5P	A8MXJ8	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A23P	A8MXZ1	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145		F8W036	122 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	RPL36A-HNRNPH2	H7BZ11	118 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ZNF205	O95201	554 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A15P	P0C7V4	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A13P	P0C7W8	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A14P	P0C7W9	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM90A24P	P0C7X0	464 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TMEM33	P57088	247 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	BLOC1S1	P78537	153 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SP6	Q3SY56	376 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145		Q6ZS49	121 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SPAG16	Q8N0X2	631 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	UBAC2	Q8NBM4	344 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	NRIP2	Q9BQI9	281 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	DDA1	Q9BW61	102 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	RHOF	Q9HBH0	211 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PARP11	Q9NR21	331 aa		13.87	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PQLC2L	A1A4F0	135 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM221A	A4D161	298 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145		E5RGE8	158 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	NEURL1	O76050	574 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ZNF883	P0CG24	379 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	MUC1	P15941	1255 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	LHX2	P50458	406 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ZXDA	P98168	799 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ZNF611	Q8N823	705 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	LYPD6B	Q8NI32	183 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	GLYATL2	Q8WU03	294 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	GUCD1	Q96NT3	240 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TAAR9	Q96RI9	348 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FAM173A	Q9BQD7	235 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	REPIN1	Q9BWE0	567 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	HRH4	Q9H3N8	390 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PLSCR2	Q9NRY7	297 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SLC7A10	Q9NS82	523 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PARPBP	Q9NWS1	579 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	LRFN1	Q9P244	771 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	RCC2	Q9P258	522 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	NOSIP	Q9Y314	301 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	NSG2	Q9Y328	171 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	LSM5	Q9Y4Y9	91 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	MED6	O75586	246 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	CLDN18	P56856	261 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ARF1	P84077	181 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SPINK14	Q6IE38	97 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	LYZL2	Q7Z4W2	148 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	OR2M7	Q8NG81	312 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FGF23	Q9GZV9	251 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SMOC1	Q9H4F8	434 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TREM1	Q9NP99	234 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PRELID1	Q9Y255	219 aa		13.86	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	MRPL33	O75394	65 aa	Known RBP	13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	CD5	P06127	495 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	COX5B	P10606	129 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	NME2	P22392	152 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FXYD4	P59646	89 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PHLDA2	Q53GA4	152 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SLC25A26	Q70HW3	274 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SAXO1	Q8IYX7	474 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	LGI3	Q8N145	548 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TMEM105	Q8N8V8	129 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ERGIC1	Q969X5	290 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	THOC3	Q96J01	351 aa	Known RBP	13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SYT3	Q9BQG1	590 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TMEM231	Q9H6L2	316 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ZFP57	Q9NU63	452 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	NDRG3	Q9UGV2	375 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	POMT1	Q9Y6A1	747 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SS18L1	O75177	396 aa	Predicted RBP	13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	F10	P00742	488 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	AADAC	P22760	399 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	GLP1R	P43220	463 aa		13.85	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	NPBWR2	P48146	333 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms