RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 UTP23Q9BRU9 249 aaKnown RBP3.69□□□□□ -1.82
USP54-206ENST00000433394 CHCHD7Q9BUK0 85 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 MAP1LC3CQ9BXW4 147 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 ULBP2Q9BZM5 246 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 SYT4Q9H2B2 425 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 OR51B5Q9H339 312 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 PSTPIP2Q9H939 334 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 WFDC1Q9HC57 220 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 C8orf17Q9NRJ1 99 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 ATPIF1Q9UII2 106 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 SLC7A11Q9UPY5 501 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 C15orf41Q9Y2V0 281 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 KLF12Q9Y4X4 402 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 LRRC42Q9Y546 428 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 RIC1Q4ADV7 1423 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 BCORQ6W2J9 1755 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 SCN7AQ01118 1682 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 RTL9Q8NET4 1388 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 QSER1Q2KHR3 1735 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 A0A0A6YYD5 115 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 TMEM150BA6NC51 233 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 SULT1B1O43704 296 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 GMDSO60547 372 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 CRTAPO75718 401 aaPredicted RBP3.68□□□□□ -1.82
USP54-206ENST00000433394 CCNE2O96020 404 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 TRBV12-3P01733 135 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 HLA-DQB1P01920 261 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 CD74P04233 296 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 LINC00869P0C866 280 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 MUC1P15941 1255 aaPredicted RBP3.68□□□□□ -1.82
USP54-206ENST00000433394 PRKACBP22694 351 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 CXCR1P25024 350 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 MSNP26038 577 aaKnown RBP3.68□□□□□ -1.82
USP54-206ENST00000433394 PSMB5P28074 263 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 POLR2IP36954 125 aaKnown RBP3.68□□□□□ -1.82
USP54-206ENST00000433394 RWDD2BP57060 319 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 ADIGQ0VDE8 80 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 COTL1Q14019 142 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 C6orf99Q4VX62 202 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 HHATQ5VTY9 493 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 ASCL4Q6XD76 172 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 SHISA6Q6ZSJ9 500 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 RBM45Q8IUH3 476 aaKnown RBP3.68□□□□□ -1.82
USP54-206ENST00000433394 OR1L1Q8NH94 360 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 OR2M4Q96R27 311 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 COPS4Q9BT78 406 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 SIRT7Q9NRC8 400 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 AGPAT3Q9NRZ7 376 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 SIGLEC7Q9Y286 467 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 AP3M1Q9Y2T2 418 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 LAMB2P55268 1798 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 MYO3BQ8WXR4 1341 aa3.68□□□□□ -1.82
USP54-206ENST00000433394 C4BP0C0L5 1744 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 UBR3Q6ZT12 1888 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 TRAV8-7A0A075B6U6 113 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 TRAV8-6A0A0B4J262 113 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 TRAV40A0A0B4J280 105 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 ISPDA4D126 451 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 C5orf63A6NC05 138 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 HSBP1L1C9JCN9 74 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 CIAO1O76071 339 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 RANBP1P43487 201 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 DNASE1L1P49184 302 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 RGS6P49758 472 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 PPP1CAP62136 330 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 IFFO1Q0D2I5 559 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 EIF4EBP1Q13541 118 aaPredicted RBP3.67□□□□□ -1.82
USP54-206ENST00000433394 TAL2Q16559 108 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 NDUFAF6Q330K2 333 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 SLC25A35Q3KQZ1 300 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 RNASE13Q5GAN3 156 aaKnown RBP3.67□□□□□ -1.82
USP54-206ENST00000433394 IDNKQ5T6J7 187 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 FAM27D1Q5T7N8 215 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 LIN9Q5TKA1 542 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 CA13Q8N1Q1 262 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 TCAIMQ8N3R3 496 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 DRAM1Q8N682 238 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 CYB561A3Q8NBI2 242 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 GABRG3Q99928 467 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 NUDT9Q9BW91 350 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 CHID1Q9BWS9 393 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 ZNF442Q9H7R0 627 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 FBXO6Q9NRD1 293 aaPredicted RBP3.67□□□□□ -1.82
USP54-206ENST00000433394 NECAP2Q9NVZ3 263 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 SDHAF2Q9NX18 166 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 C21orf62Q9NYP8 219 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 CBY1Q9Y3M2 126 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 COL24A1Q17RW2 1714 aa3.67□□□□□ -1.82
USP54-206ENST00000433394 ABCC12Q96J65 1359 aa3.66□□□□□ -1.82
USP54-206ENST00000433394 SPEF2Q9C093 1822 aa3.66□□□□□ -1.82
USP54-206ENST00000433394 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
USP54-206ENST00000433394 ZNF593O00488 134 aaPredicted RBP3.66□□□□□ -1.82
USP54-206ENST00000433394 CYB5R3P00387 301 aaPredicted RBP3.66□□□□□ -1.82
USP54-206ENST00000433394 RPN2P04844 631 aa3.66□□□□□ -1.82
USP54-206ENST00000433394 IGKV5-2P06315 115 aa3.66□□□□□ -1.82
USP54-206ENST00000433394 GNRHRP30968 328 aa3.66□□□□□ -1.82
USP54-206ENST00000433394 PRLHRP49683 370 aa3.66□□□□□ -1.82
USP54-206ENST00000433394 PLTPP55058 493 aa3.66□□□□□ -1.82
USP54-206ENST00000433394 MLF1P58340 268 aa3.66□□□□□ -1.82
USP54-206ENST00000433394 ARPC4P59998 168 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms